Gene Swol_1574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1574 
Symbol 
ID4282178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1792471 
End bp1793841 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content49% 
IMG OID638138454 
ProductMiaB-like tRNA modifying enzyme 
Protein accessionYP_754248 
Protein GI114567094 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.54579e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG TAGCTTTTCA TACCCTGGGA TGCAAAGTAA ACCAGGTAGA AACAGAACAG 
CTGAAGGAAA AGTTCATACA AAGAGGCTAT CAACTGGTTG ACTTCAATGA AAGCGCGGAT
TTGTACATCG TTAACACCTG CACTGTGACT CACAGCAGCG ACCGCAAATC CAGAGCCATG
CTGCGCCGTG CTGCCAGAAG GAATCCGGGA GCGATGGTCG TTGCTACCGG TTGCCTGGCC
CAGGTAGATG CCGCGCAACT GGCAGCCATA CCCGGACTGA ATCTAATAGT AGGCAGTCAG
CAAAAAGAAG CTATTCTCGA ACTGATTGAA GGACAGGTAA GCAGTAGGAG CGAGTCGGAG
CCCCTTATTG TATGCCCACC GCTGGTGGCG GGAAAAAAGC TCCCCCCGGT TATCTATTCT
AAGCGGCATG AAAGATCCCG AGCTTTTGTC AAGATTCAGG ATGGATGCCA GAGTTATTGT
TCTTACTGTA TCGTCCCTTT TGCCCGCGGT CCTTCCCGGA GCAAACTGCC AGAAGATGTG
GCAGCCGAGT TGCAGCAACT GGTGGATCTG GGATATCACG AAATCGTATT GACCGGTATT
CATACCGGGC TTTATGGAAA TGACCTGGAA GATTGGAACC TTAGTAGATT GCTGCGGTTG
CTTTTCGCTC GGGTGGAAGG TAATTACCGC ATCAGGTTGA GTTCCCTGGA GCCTGTGGAG
ATAGACGAGG AGTTGTTGGA GATGGCAGCC GGCGGAGAAA GGCTTTGCCG TCACTTTCAT
ATTCCCTTGC AGAGTGGAAG CAGCCGCATA TTGCGGGCCA TGAACCGCCG TTATGACCGG
GAATTCTATT ACAAACTGGT TCAGCATATA GTACAGAGAG TAAAGGGAGC GGCCGTAACC
GCCGATGTAA TGGTGGGCTT TCCCGGTGAA GAAAAGAAGG ATTACCAGGA TACCCTGGCT
TTGTTACAGG ATTTACCCGT ACTGGACTTG CATGTATTTA AATACTCAAA ACGACCGGGA
ACGGCTGCCG CTAAAATGGA ACCTCAGGTC AGTGACAGAG AAAAAGAAAT GAGAAGCGCC
GAACTAATAC AACTGGCTGA AGCAAAAAAG CGGAGTTTCA TAAACCAGCA GCTGGGACAG
GAACTGGAAG TGCTGGTAGA GCAGATAGTA GGAGAAGACT CTTTCCGGGG TCTTAGCGAT
AACTATTTAG AACTGGAGTT TTCTTCCCCC CGGGAACTGA TTGATGAGCT GACCGGAGAA
CTAATCATGG TCGAGCTGGA AGCTATGGAA AACAGCATTG CCCGGGGGAG GTTATTATAT
GGCTCTTTTC TAATAGAACC CTACTGCCAC AATACTGACC AGGAAGGATA G
 
Protein sequence
MKKVAFHTLG CKVNQVETEQ LKEKFIQRGY QLVDFNESAD LYIVNTCTVT HSSDRKSRAM 
LRRAARRNPG AMVVATGCLA QVDAAQLAAI PGLNLIVGSQ QKEAILELIE GQVSSRSESE
PLIVCPPLVA GKKLPPVIYS KRHERSRAFV KIQDGCQSYC SYCIVPFARG PSRSKLPEDV
AAELQQLVDL GYHEIVLTGI HTGLYGNDLE DWNLSRLLRL LFARVEGNYR IRLSSLEPVE
IDEELLEMAA GGERLCRHFH IPLQSGSSRI LRAMNRRYDR EFYYKLVQHI VQRVKGAAVT
ADVMVGFPGE EKKDYQDTLA LLQDLPVLDL HVFKYSKRPG TAAAKMEPQV SDREKEMRSA
ELIQLAEAKK RSFINQQLGQ ELEVLVEQIV GEDSFRGLSD NYLELEFSSP RELIDELTGE
LIMVELEAME NSIARGRLLY GSFLIEPYCH NTDQEG