Gene Swol_1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1561 
Symbol 
ID4282429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1782390 
End bp1783271 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content44% 
IMG OID638138441 
ProductEra, Era/TrmE family GTP-binding protein 
Protein accessionYP_754235 
Protein GI114567081 
COG category[R] General function prediction only 
COG ID[COG1159] GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.400098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCTG GATTTGTAAG TATTGTGGGC CGCCCCAATG TGGGAAAATC TACTCTGCTC 
AATACAATTA TCGGAGAAAA AATCGCTATA GTATCGGAGA AGCCCCAGAC AACCAGAACC
AGAATTCAGG GCATATATAC CTGTGAAAGG GGGCAGGTAA TCTTTGTTGA TACCCCTGGT
ATTCATAAAC CCAAGCACCT CTTGGGTGAA TACATGGTAA AGGTATCTGC GCGCAGCCTG
GAAGAGGTAG ATATAATATA CTATATGACT GATGTAACCC GCCCTTTTGG CGGCGGTGAG
AGCTTTATCC TGGAACAATT AAAAGACGCC AGGGTACCGG TTTTTTTACT GGTTAATAAA
ATTGACCTGG TTAGTGAGCA AGAAGTAAAG GATTATATTC AAATCTTTAA CCAGCAGAGG
AGTTTTTCTG AGGTAGTTTC TATATCAGCC GCTTGTGGTA CTAATCTGCA GCTTTTGATA
GACAAAACGC TGGATGCCTT GCCGGAAGGA CCCCTCTATT ATCCGGAGGA TGACCTTACC
GACCAACCCA TCTATTTACT TATAGCTGAA TTAATAAGGG AGAAGGCTTT AATGCTCACC
CGTGATGAGG TTCCGCATTC ACTGGCGGTG GAAGTGGAAG AATTCAAAAA GCAAAGCAAT
GGTAAGGTCT ATGTTAGGGC TGCCATATAT ATGGAAAGGG ATTCCCAAAA GGGGATATTA
ATCGGTAAAA AGGGTCAAAT GTTAAAGACC ATCGGGGAGC AGGCCCGCCA GGATATTGAA
AGCTTATTGG ATACGGCTGT TTATCTCGAT TTATGGGTTA AGGTTAAAAA GAACTGGCGT
GATAACGAGG GTACCCTGAA TCAGCTCGGC TATCGTATGT AG
 
Protein sequence
MKSGFVSIVG RPNVGKSTLL NTIIGEKIAI VSEKPQTTRT RIQGIYTCER GQVIFVDTPG 
IHKPKHLLGE YMVKVSARSL EEVDIIYYMT DVTRPFGGGE SFILEQLKDA RVPVFLLVNK
IDLVSEQEVK DYIQIFNQQR SFSEVVSISA ACGTNLQLLI DKTLDALPEG PLYYPEDDLT
DQPIYLLIAE LIREKALMLT RDEVPHSLAV EVEEFKKQSN GKVYVRAAIY MERDSQKGIL
IGKKGQMLKT IGEQARQDIE SLLDTAVYLD LWVKVKKNWR DNEGTLNQLG YRM