Gene Swol_1466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1466 
Symbol 
ID4282331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp1681310 
End bp1682248 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content55% 
IMG OID638138344 
ProductHK97 family phage major capsid protein 
Protein accessionYP_754142 
Protein GI114566988 
COG category[R] General function prediction only 
COG ID[COG4653] Predicted phage phi-C31 gp36 major capsid-like protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.000392324 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAATT ATTCTGAGAT GCTGCCCCAC ATCACCGGCA GCGACTACGA AACTCATTTC 
TGGGACGCTC TCCGTGGCAA GCAGGGCTAT AAGGAGCAGG TTTCCAAGGG CGTGGATAAT 
CGCTCCGGCG CTCTCACCCT CAATCCCAAG GGCCAGAGCA GATATATGGC TGCACTGGAA 
AAGGAAGGTC TGTTCCGCAG CCTTGCTACC GACATCCGTG CCTACAACTA CAATTACAAC 
ATCAAGACCG CAAACGGCAA TGATGTGGCG GCATGGGTTG AGGAAGGCGG CACCATCCCC 
ATTGCTGACG GCATGGGAGA TTTCAACGAT ATCGCCCTCA AAATCCACAA GCTGGTGGTA 
TTCCTGAAAT TGGAGGAGGC ATTCGTTAAG GACGCTACCT TCAAGATTGA GGACTACCTC 
GTTTCCCGTC TGGCCAAGAA CTTTGGCAGA GCCGAGGATA ACGGCTTCAT CAACGGCACC 
GGAGAGAATA TGCCCACGGG CATCCTCGCT GCGTCCGGCG GTGCAGAGGT CGGTGTTACC 
ACTAATGCCA TCACCTACGA GGATGTGGTC AAGCTGTTCT TCTCTGTCAA GCCGGAGTAC 
CGCAGAAACG GCGTGTGGCT CATGAATGAT GAGACTGCGC TGGCACTCCG CACCCTCAAG 
GATGACGGCG GCAATTACAT CTGGAATCAC GCCAACGATA CCATCCTCGG CAAGAAGGTC 
TGCATTTCCG AGTTCATGCC TTCTGCCGGA ACCGGGGCTA AGCCTATCGC CTTCGGTGAC 
TTCTCCTACT ACTGGATCGT GGACCGCCGT CCTCTCAGCA TCCGTACCCT CACCGAGCAG 
TATGCTCTGG AGGACTGCAT CGGCTATCTG GCATACGAGT TCCTTGACGG AAAACTTGTC 
CGTCCCGAAG CCATCAAGGT CATGGAGATG ACCGCCTAA
 
Protein sequence
MKNYSEMLPH ITGSDYETHF WDALRGKQGY KEQVSKGVDN RSGALTLNPK GQSRYMAALE 
KEGLFRSLAT DIRAYNYNYN IKTANGNDVA AWVEEGGTIP IADGMGDFND IALKIHKLVV 
FLKLEEAFVK DATFKIEDYL VSRLAKNFGR AEDNGFINGT GENMPTGILA ASGGAEVGVT 
TNAITYEDVV KLFFSVKPEY RRNGVWLMND ETALALRTLK DDGGNYIWNH ANDTILGKKV 
CISEFMPSAG TGAKPIAFGD FSYYWIVDRR PLSIRTLTEQ YALEDCIGYL AYEFLDGKLV 
RPEAIKVMEM TA