Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1435 |
Symbol | |
ID | 4282926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 1644491 |
End bp | 1645246 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638138315 |
Product | hypothetical protein |
Protein accession | YP_754113 |
Protein GI | 114566959 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0748903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGGAC ACTCCAAATG GGCTAATATC AAGCATAAAA AGGCCCGCTC GGATGAAAAA AGAGGAAAAG AGTTTACCAA GATAGCCAAA GAAATTACTA TTGCCGTGCG TAGTGGTGGT AGCGGAGATC CTGAAGCCAA TTCCAAATTA AAGCTGGCCA TTCAAAAGGC CAAGGCTATA AATATGCCTA ATGAGAACAT AAATCGCGCG GTTAAGAAAG GTACTGGAGA AATTGACAGC GAAACCATCG AAGAAATAAT ATATGAAGGC TATGCCCCCG GGGGAATAGC GGTAATGTTG GAAATTGCTA CCGATAATCG CAACCGAACT GCATCAGAAA TCAGGCATCT TTTTTCTAAA AACAACGGGA ATCTTGGTGA GAGTGGTTGT GTAGCCTGGA TGTTCAAACG GGTAGGCTTA ATTAGCATAA AAAAGGATAA GCTGAACATG GAGGAAGAAG AATTTATGCT AAAGGTATTG GATGCAGGTG CCGAGGATGT CAGAGAGGAA GACGAGGAAT ATGAAGTCCT GACTTTACCA GAAAGCTTTA TGCTGGTAAA GGAAGCTATG GAAGAGGAAA AGCTTCTCAT AGAAGAGGCT GACATAGTAA TGCTGCCGGA AAATACGGTT GACATTACTG ATGTTGACAT GGCGGGGAAA ATCATAAAAC TCATTGAGCT TTTGGAAGAT CACGATGATG TACAAAATGT CTACACCAAT ATGTCTATTC CTGATGAAAT AATTGCAGCA CTCTAA
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Protein sequence | MAGHSKWANI KHKKARSDEK RGKEFTKIAK EITIAVRSGG SGDPEANSKL KLAIQKAKAI NMPNENINRA VKKGTGEIDS ETIEEIIYEG YAPGGIAVML EIATDNRNRT ASEIRHLFSK NNGNLGESGC VAWMFKRVGL ISIKKDKLNM EEEEFMLKVL DAGAEDVREE DEEYEVLTLP ESFMLVKEAM EEEKLLIEEA DIVMLPENTV DITDVDMAGK IIKLIELLED HDDVQNVYTN MSIPDEIIAA L
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