Gene Swol_1408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1408 
Symbol 
ID4282712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp1621403 
End bp1621981 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content46% 
IMG OID638138288 
ProductGTP cyclohydrolase I 
Protein accessionYP_754086 
Protein GI114566932 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0190569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAA AAGTAATAGA TGAAGCCAAA ATTGAAGAAG CTGTTCACAT GATACTGGAA 
GCAATTGGGG AAGACCCGGA ACGGGAAGGC TTGCAAAACA CCCCGAAAAG GGTAGCTCGC 
ATGTATAGAG AGATATTTGC CGGTATGAAT TCTAACCCCA GGGAATTCCT GCAGGTTTCC 
TTTACAGAAT TTCATGATGA ACTGGTATTG GTAAAGGATA TTCCCTTGTA TTCGATGTGT 
GAACACCACT TGCTTCCCTT TTATGGCAAA GCTCATGTAG CCTACATCCC CCGCGGTGGT 
AAAGTGGTGG GAATAAGCAA GTTGACCCGG GTGGCAGAAG CCTATGCCAT GCGCCCCCAG 
TTGCAGGAAA GACTTACTTC CCAAATAGCC GACTGTATAA ACGATAGCTT AAAGCCTTTT 
GGGGTGGCAG TAGTAATCGA AGCGGAACAC ATGTGCATGA CCATGAGAGG TGTACGCAAG 
CCGGGAGCCT TAACTGTAAC CTCTGCCGTT CGTGGAATTT TTGAGACCAG GCCTGAAACC 
AGGGCTGAAG TCTTCTCTCT TATTAACCAG AAAATCTAA
 
Protein sequence
MQKKVIDEAK IEEAVHMILE AIGEDPEREG LQNTPKRVAR MYREIFAGMN SNPREFLQVS 
FTEFHDELVL VKDIPLYSMC EHHLLPFYGK AHVAYIPRGG KVVGISKLTR VAEAYAMRPQ 
LQERLTSQIA DCINDSLKPF GVAVVIEAEH MCMTMRGVRK PGALTVTSAV RGIFETRPET 
RAEVFSLINQ KI