| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1406 |
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| Symbol | |
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| ID | 4282710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 1620069 |
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| End bp | 1620788 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638138286 |
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| Product | ribosomal large subunit pseudouridine synthaseB (pseudouridylate synthase) (uracil hydrolyase) |
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| Protein accession | YP_754084 |
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| Protein GI | 114566930 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.541928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGATTGG CCAAATACCT GGCTGAATCT GGGATATCCT CCCGCAGGCA GGCGGAAAGA
TTAATTACCC AGGGCAAGGT CAAGGTAAAC GATAAAACCA TAACTGAACT GGCTTTTACT
CTCAAACCTG GTGACCGGGT TGAATTTGCG GGAAAGATTA TTGAGCAGAC GGATAAGATA
TACCTATTAT TGCATAAGCC TGCCGGTTAT ATATCCAGCC TTGCTGATCC GCAGGGAAGG
CCCCGGGTTA TTGATTTGCT TAGCGCTGTA AATACCCGGG TATTTCCCGT GGGCAGGTTG
GACTATGATA CCGAAGGCTT GCTGCTGCTA AGTAATGATG GTGAATTTAG CAACCTGATG
ACCCATCCCC GTTATTTAAT TCCCAAAAAA TATGAAGCAT GGGTACAGGG TTTAGTTAAG
CCTGATACTA TAAGGCAATT GGAGCAAGGG GTGGCTTTGG AGGATGGTAT TACTGCTCCT
GCCCGGGTAA GGTTGCTAAG CAGCAAGAAA GGACAAAGTC TGTTGGAATT AGAAATTCAT
GAAGGGAAAA AGAGGCAGAT TAAAAGAATG TGCCTGGCAG TTGGACACCG GGTAACAAAA
CTAAAAAGGA CAGCCCTGGC CTTCTTAACT CTGGAAGGAG TGCCCCGGGG CCAGTTTCGC
TTTTTGACAG CTTCGGAAGT AGAGAGTCTG ATAATGCTGG CCAGGCAGTC AGGGAAATAA
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| Protein sequence | MRLAKYLAES GISSRRQAER LITQGKVKVN DKTITELAFT LKPGDRVEFA GKIIEQTDKI
YLLLHKPAGY ISSLADPQGR PRVIDLLSAV NTRVFPVGRL DYDTEGLLLL SNDGEFSNLM
THPRYLIPKK YEAWVQGLVK PDTIRQLEQG VALEDGITAP ARVRLLSSKK GQSLLELEIH
EGKKRQIKRM CLAVGHRVTK LKRTALAFLT LEGVPRGQFR FLTASEVESL IMLARQSGK
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