Gene Swol_1400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1400 
Symbol 
ID4282635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1615491 
End bp1616549 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content50% 
IMG OID638138280 
Product2-oxoisovalerate ferredoxin oxidoreductase, alpha subunit 
Protein accessionYP_754078 
Protein GI114566924 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGG TATTGATGAA AGGAAATGAA GCACTGGCCG AAGGGGCATT AATTGCCGGT 
TGCCGGGGAT TTTTCGGTTA TCCCATCACC CCCTCCAGTG AAATTGCGGA ATATATGGCC
AGGAAACTGC CCAAAATCGG AGGAGCATTC ATTCAGGCTG AAAGTGAACT GGCGGCTATT
AACATGATTT ACGGCGGATC ATCGACCGGT ACCCGGGTTA TGACAGCTTC ATCAGGTCCG
GGAATCAGCT TGAAACAGGA GGGCATTTCG TTTATTTCTG AAGCCGAACT ACCTTGTTTA
ATAGTAAATG TTTCCCGGGG TGGCCCGGGC CTGGGTGGTA TACAACCTTC CCAGGCGGAT
TATTTCCAGG CTACTCGCGG CGGAGGACAT GGAGATTATC GTATAATTGT TCTGGCCCCA
TCCAGCTCTC AGGAAATGAT GGATCTGGCT ATTCTGGCTT TCGAGCTGGC GGACAAGTAC
CGTACTCCGG TGATGCTAAT GGCGGAAGGG ACCCTGGGCA ACCTTATGGA ACCGGTTATT
GTCCGGGAAG CGGTCACAGA ATTTCCGGAT AAACCCTGGG TCACTACCGG TTGTGTGGGG
AGGAAACCCA ATGTAATCAA TACCTTGCAC CTGACCCAGG AGGAGTTAGA AGGAAGAAAT
CGCCATCTGA CGGAAAAATA TAGAATGATT AGCGAGAATG AAAAGAGAGC CGAGTCTTTT
TTGTTAGATG ATGCGGATAT AGTTGTAGTA GCTTTTGGGC TTTTAGCCCG GATAATTAAG
AAATCCGTAA TGGAAGCCAG AAAGAAGGGA GTCAAGGCGG GCTTGATCAG ACCGGTAACG
CTCTGGCCTT TCCCGGATGA GCATATACAG GCCGTTTCCA GGACAGCGCG GATTATTCTG
TCGGTGGAGA TCAACATGGG ACAGATGGTA GAAGATATCC GCTTGGCGGC AGGGGGGAAA
ATCCCGGTTG AGTTTTACGG GCGCATAGGT TTCACTCCCA ATCCAGAAGA GATTACCCGG
CAGTTGCTGT TTATTGCGGA AAGGGAGGGA TTGCTATGA
 
Protein sequence
MKKVLMKGNE ALAEGALIAG CRGFFGYPIT PSSEIAEYMA RKLPKIGGAF IQAESELAAI 
NMIYGGSSTG TRVMTASSGP GISLKQEGIS FISEAELPCL IVNVSRGGPG LGGIQPSQAD
YFQATRGGGH GDYRIIVLAP SSSQEMMDLA ILAFELADKY RTPVMLMAEG TLGNLMEPVI
VREAVTEFPD KPWVTTGCVG RKPNVINTLH LTQEELEGRN RHLTEKYRMI SENEKRAESF
LLDDADIVVV AFGLLARIIK KSVMEARKKG VKAGLIRPVT LWPFPDEHIQ AVSRTARIIL
SVEINMGQMV EDIRLAAGGK IPVEFYGRIG FTPNPEEITR QLLFIAEREG LL