Gene Swol_1358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1358 
Symbol 
ID4282784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1572514 
End bp1573473 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content41% 
IMG OID638138239 
Producthypothetical protein 
Protein accessionYP_754037 
Protein GI114566883 
COG category[V] Defense mechanisms 
COG ID[COG2720] Uncharacterized vancomycin resistance protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGCATTC GATATATCAG GATTGGATTG ATTTCTTTAC TTATTTTATT ATTAGGAACA 
ATAAATCATG CTATATATAC TGACAATTTG TCTGACCGTC CCGGGAAAAA TCTGGATTTT
CTGCCTTATG CTACATCAAA GGACAGAATT ATTTATTCAA CCCCATCTGC TTCAAGCTCA
GTAACTTTAC TTCCCTGGGA AAATGACCCG GACTTTCAAG CAGCTATGGC CGAGAATAAA
GCCAAGATAC AATTAGCCAA CTACTGTACA GTATTACAGA ACCCTTTGCC GGGGGAAGAG
ACCAACGTTT ACATTGCTGC CTGCTTATTG CAAGGAACAG TTGTAAAATC CGGCCAAATA
TTTTCTCAAA ATGAGAAAAT TGGGCCCTAC AGCCAGGATA AAGGATTTCA ACCTGGACCC
GTTTATATTG GCCATCAGTT AAAAACTACG GTTGGCGGGG GGGTATGCAA AATTGCTTCA
ACCCTGTATA ATGTTACAAT TTTGTCGAAT TTGCCGGTTA TTGAACGATA CGCCCACAGC
ATGCCGGTTC CCTATGTGCC GCTCGGGCAA GATGCAACGG TTTGTTATGG AGTTAAGGAT
TTTAAATTTT TGAACAATAG CCCTTATCCT ATTTTAATCT GGGCAGAGAG TATCGGGAAC
CGGCTTTATA TTGCCTTCTA TGGGCAAACA ACTCCTCCTA AAGTTAAATG GCACCACGAA
ATAGTAAAAG AAATTAAAAC TTATAATATT TACAGGAAAA ACTATGCCCT TGAGGCTGGA
AAAGAAAAGG TGATTTTGCA AGGGATGGAT GGTGCGGTAG TACGGTCATG GCTGACCATA
GAAGATCCCC AGCAGGGTAG AATAACCACC AAAAAACTGG GCAAAGATTA TTACAATCCC
ATGCCTTCGA TTGTTGAAAA AGGCATGAAG AAAGCCACTT CCACGATTCC ACCTCATTAA
 
Protein sequence
MRIRYIRIGL ISLLILLLGT INHAIYTDNL SDRPGKNLDF LPYATSKDRI IYSTPSASSS 
VTLLPWENDP DFQAAMAENK AKIQLANYCT VLQNPLPGEE TNVYIAACLL QGTVVKSGQI
FSQNEKIGPY SQDKGFQPGP VYIGHQLKTT VGGGVCKIAS TLYNVTILSN LPVIERYAHS
MPVPYVPLGQ DATVCYGVKD FKFLNNSPYP ILIWAESIGN RLYIAFYGQT TPPKVKWHHE
IVKEIKTYNI YRKNYALEAG KEKVILQGMD GAVVRSWLTI EDPQQGRITT KKLGKDYYNP
MPSIVEKGMK KATSTIPPH