Gene Swol_1302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1302 
Symbol 
ID4282604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1502934 
End bp1504436 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content45% 
IMG OID638138181 
Productthreonine synthase 
Protein accessionYP_753981 
Protein GI114566827 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAATATG AAAGTAGTCG AGGAAAATAT CATTCCGTCA CCGCTGCAGA GGCCATAAAA 
ATGGGGATTA GCCCGGATGG AGGTCTTTTT GTTCCTGAAT CTATTCCCCA TCTGGATGAC
AAGCAATTAA CTGCCATGGC CAGTAGTTCA TACCAGGAAA AAGCTTTTCA TATTATCAGG
CAGTTTTTGA GTGATTTTAG TGATGATGAG ATTAAGAGCT GCATTAATGG AGCTTATAAT
CAGAAAAGTT TTGATAACGA GAGAATAGCA CCTTTGGTAA AACTTGATAC AGGAGTATAT
ATTCAAGAAC TGTGGCATGG CCCTACCGCT GCCTTCAAGG ATATGGCCTT GCAGATGCTG
CCGCACCTTT TGACCATCAG TGCTCATAAA ACGGGAGAAA AGGCGGAAAT AGTCATCCTG
GTGGCTACCT CTGGAGATAC CGGTAAGGCG GCTTTGGAAG GATTTAAAGA TGTAGAAGGA
ACAAAGATTA TTGTCTTTTA TCCGGATGAG GGTGTCAGTG AAATACAAAA GCGCCAAATG
CTGACCCAGG AAGGCAATAA TGTCTATGTG GCTGCAGTTA GCGGCAATTT TGACGATGCC
CAGAACGGAG TTAAAAGGAT ATTTGCTAAT GAAGAATTTG CCGCCCGGCT GCTGCAAAAC
GGGCAGAAGT TGTCATCAGC CAACTCCATT AATTGGGGGC GTTTATTGCC CCAAATTGTT
TACTATGTGG CGGCCTATCT TGATTTGAAG GCTGCTGGGA TAGTTGAAGA AGCTCAATCA
GTAAATATAG TGGTGCCCAC GGGAAATTTC GGTAATATCC TGGCGGCTTA TTATGCCTCC
CGGATGGGGA TTCCAATAAA AAGGTTGATC TGCGCATCAA ATGCTAATAA TATCTTGACT
GATTTTATCC ACAGTGGCAT CTATGACCGC CAGCGCAAGT TTGAAAAGAC TATATCCCCT
TCTATGGACA TTCTTATCTC CTCCAACCTG GAAAGGCTTT TATTTGAAGT TACCGGTCAC
AATGCCAGTC GAGTTGCTGC CTGGATGGAA GACTTGAAGG ATAGGGGAAG ATACGAAGTA
GATGCTGTTA CTCGCGATGC CGTACAGGAC ATTTTCTGGG CGGATTTTTG CTCCGACGAA
GAGACCCTTA CTGCTATCCG CCAGACCTGG AGGGAACATA GCTATTTACT GGATACCCAT
ACGGCCGTGG CAGTAAATGT TTATCAAAAA TACCGCTCTG AAACCGGGGA TAATACTATA
AGTATTATTG CCTCTACCGC CAGCCCCTTT AAATTTGCCA ACAGCGTGGC TCAGGCTGTT
TTGGAGCCTG AATTGCTGCA GGGCAAGGAT GAATTTGAAT TAATGAACTT ACTCTCGCAG
TATACCGGTA TAGCTATACC GGTAGGGTTG AAAGAGCTGG ATAGAAGGGA AATCAGACAT
CACAGCGTCT GCTCCCAGCA GGGGATGGAA GAAATGGTTA TGTCCTTTTT GCAGCTGGTA
TAA
 
Protein sequence
MKYESSRGKY HSVTAAEAIK MGISPDGGLF VPESIPHLDD KQLTAMASSS YQEKAFHIIR 
QFLSDFSDDE IKSCINGAYN QKSFDNERIA PLVKLDTGVY IQELWHGPTA AFKDMALQML
PHLLTISAHK TGEKAEIVIL VATSGDTGKA ALEGFKDVEG TKIIVFYPDE GVSEIQKRQM
LTQEGNNVYV AAVSGNFDDA QNGVKRIFAN EEFAARLLQN GQKLSSANSI NWGRLLPQIV
YYVAAYLDLK AAGIVEEAQS VNIVVPTGNF GNILAAYYAS RMGIPIKRLI CASNANNILT
DFIHSGIYDR QRKFEKTISP SMDILISSNL ERLLFEVTGH NASRVAAWME DLKDRGRYEV
DAVTRDAVQD IFWADFCSDE ETLTAIRQTW REHSYLLDTH TAVAVNVYQK YRSETGDNTI
SIIASTASPF KFANSVAQAV LEPELLQGKD EFELMNLLSQ YTGIAIPVGL KELDRREIRH
HSVCSQQGME EMVMSFLQLV