Gene Swol_1270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1270 
Symbol 
ID4281993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp1468519 
End bp1469535 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content44% 
IMG OID638138145 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_753950 
Protein GI114566796 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.000102592 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAAAGG GCGTTAGACT TGCTATAGTT GGAGCAACAG GTGCTGTAGG GCAGGAAATG 
ATGAAGATTC TGGAAGAGCG AGAGTTTAAA GTTAAGGAGC TAATTTGCCT GGCTGACCCT 
CGCGAAGAAG GAAACAAAGT GAGATTCAGA GATGAAGATC TTACGGTTAA AGCAGCTAAT 
GCTGCGGCTT TCAAACAGGC AGATATAGCT TTATTTGCGG TTAATACTGA TATAAGTAAG 
GCTCTGGCTC CTCTGGCCCG GGAGAATAAT TGCCTGGTAA TTGATAACAG TTATGCTTTC 
AGATTGGAGG AAAATGTGCC TCTGGTAGTT CCCGAGGTAA ATCCGGAAGA CATTGCTAAG 
CATCAGGGTA TTATTGCTAA TCCTAATTGT TCTACCACCA TTATGGTAGT AGCGTTAAAC 
CCTATTCATA AGGCAGCCCG CTTAAAAAGG GTATTGGTGT CGACCTACCA GGCGGTTTCT 
GGAGCCGGAA AAGCTGGAAT CGATGAGCTT GAACAGCATG TTCGGGCCTA TTTGGCTGGA 
GATGATATAG TTCCTGAGGT TTTCCAACAT CCCATAGCCT TTAACCTGAT TCCGCATATT 
GATGATTTTC TATCAGATAA TTATACCCGC GAAGAAATGA AGTTGGTTTG GGAGACCCGC 
AAGATAATGC ACGCTCCGGA TTTGAAGATT GCTGCTACGG CAGTTAGAGT TCCGGTATTT 
AGAAGCCATT CCGAATCCAT CACGGTGGAG ACGGAACTAC CACTAAAGGT AGATGAAGTT 
AAAACGATTT TCTCCCAGGC CCCTGGAGTA GTATTACAGG ATCAACCGGA AAACAAACTA 
TATCCCATGC CCCTTTATAC TTCAAATAAG GATGAAGTCT ATGTAGGCAG GATCAGGCAG 
GATTTGTCTT TAGATAATGG CATTCTCTTT TGGGTGGTTG CCGACCAGAT TCGAAAAGGA 
GCAGCTACTA ATGCAATACA AATTGCAGAA ATAGTGGTTA ACGATAGTCT TTATTAA
 
Protein sequence
MTKGVRLAIV GATGAVGQEM MKILEEREFK VKELICLADP REEGNKVRFR DEDLTVKAAN 
AAAFKQADIA LFAVNTDISK ALAPLARENN CLVIDNSYAF RLEENVPLVV PEVNPEDIAK 
HQGIIANPNC STTIMVVALN PIHKAARLKR VLVSTYQAVS GAGKAGIDEL EQHVRAYLAG 
DDIVPEVFQH PIAFNLIPHI DDFLSDNYTR EEMKLVWETR KIMHAPDLKI AATAVRVPVF 
RSHSESITVE TELPLKVDEV KTIFSQAPGV VLQDQPENKL YPMPLYTSNK DEVYVGRIRQ 
DLSLDNGILF WVVADQIRKG AATNAIQIAE IVVNDSLY