Gene Swol_1262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1262 
Symbol 
ID4281985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1457456 
End bp1458775 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content42% 
IMG OID638138137 
Product2-methylthioadenine synthetase 
Protein accessionYP_753942 
Protein GI114566788 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.467346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATATTG GCTTTATTAG TTTAGGTTGT TCCAAGAACC GTGTAGATAC TGAGGTGATG 
ATGGCGGCCC TGAAAAAGGC CGGGCATAGA ATAGTAAATT CGCTGGAAAG AGCGGATTTA
GTAGTTGTCA ATACCTGTGG TTTTATTACA CCGGCAAAAG AAGAATCAAT AGAAGCAATT
ATTGAAACGG CTGAATTAAA GAAAAAGGGA AGCCTGCAAT TTCTTATCGC TGCTGGTTGC
TTGTCTCAAC GCTATGGGCG AGAATTATTA TTGGAGATAC CGGAATTAGA TGGGGTTTTC
GGCATTTCCT CTGTATCTTC CATAGCTGGA GTTGTTAACC GGATTGCTCA GGGAGAGAGA
GTTTGCTTTA CAGAAGCAAC CCCGACCGAA TACTTCGAAA AAGGACATAG AATACTTACT
ACGCCCCCTG GCTCGGCCTA TTTAAAGATA AGTGAGGGCT GTAATAATTC TTGCTCTTAT
TGTGTCATAC CTTCCATCCG AGGCAAATTA CGCTCCAGAC AGATTAATGA ATTGCTGAAT
GAAGCAGCGC AACTGCTTAA AATGGGTATA AAAGAACTGG TACTCGTAGC CCAGGATACT
TCTGCCTATG GCCATGACAT TTCTCCCCAG TCGGCACTCC CCACACTCTT AAGAGAGTTA
TCCAAGCTTG ACGGTCTTGA GTGGATTCGT TTAATGTACC TGCATCCTCT TTACTTGAGT
GATGATATAA TTGATGTTGT TGCCTATGAA AACAAAGTGC TCCCTTACCT GGACATTCCC
ATTCAACATG CTTCTTCAAA AATTCTGAAA CTAATGCATC GCCGGCATGA TAACAGTCAT
TTACGAACGA TGATAAGCAA GTTGCGGGCA AGAATCCCCA ATCTAACCTT GCGCACCACA
GTAATGCTCG GATTTCCCGG TGAAGAAGAA AAGGATTTTG CCGAGCTCTA TGAATTTGTG
GCCGAAAGTC AATTTGATTG GTTGGGGGCT TTCAGTTTTG TCCCGGAGGA AGGCAGTAAG
GCTGCATTGC TGCCGAATCA AATTGAGGAT GAAATAAAGG CAGAACGAAA GGATAAGATA
CTAAGACTCC AGCAAAAAAT TACCCGGCAA AAGAACCTGG CGCGAATTAA TACCCAGGAA
AAGGTTCTAA TTTCCTCGCA ACTCAGCAAA AATTTATTTG TTGGAAGAAC TTATTTCCAG
GCCCCGGAGG TTGATGGATT AACTCTGGTA AAAACAGATT TTAAATTAAC CAAAGGCGAC
TTTGTTGATG TACAATTAGT AGGGGTAAGG AACTACGATA TGATTGGGGA ATACCAATGA
 
Protein sequence
MNIGFISLGC SKNRVDTEVM MAALKKAGHR IVNSLERADL VVVNTCGFIT PAKEESIEAI 
IETAELKKKG SLQFLIAAGC LSQRYGRELL LEIPELDGVF GISSVSSIAG VVNRIAQGER
VCFTEATPTE YFEKGHRILT TPPGSAYLKI SEGCNNSCSY CVIPSIRGKL RSRQINELLN
EAAQLLKMGI KELVLVAQDT SAYGHDISPQ SALPTLLREL SKLDGLEWIR LMYLHPLYLS
DDIIDVVAYE NKVLPYLDIP IQHASSKILK LMHRRHDNSH LRTMISKLRA RIPNLTLRTT
VMLGFPGEEE KDFAELYEFV AESQFDWLGA FSFVPEEGSK AALLPNQIED EIKAERKDKI
LRLQQKITRQ KNLARINTQE KVLISSQLSK NLFVGRTYFQ APEVDGLTLV KTDFKLTKGD
FVDVQLVGVR NYDMIGEYQ