Gene Swol_1227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1227 
Symbol 
ID4282142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1418507 
End bp1419580 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content43% 
IMG OID638138102 
Producthypothetical protein 
Protein accessionYP_753907 
Protein GI114566753 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.75541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCAA TAGAAAAAAA GCAGCTTTTA GGTTTGGACC TGAATCAAAT GGAAGAATTT 
TTGCTCGGCT TGGAGGAACC TCGCTTTCGG GGGCGACAGG TATATAAATG GATATATCAG
AAAGAATGTA GTTCTTTTTA TGAAATGAGT GACCTGCCTC GCTCCCTGAG AAAAAAACTC
GATGAAAAGG CCCGGGTTTC CATACCCCGG GTACTTAAAC AAAGAGTAGG GAAAGATGGT
AGTCGTAAAT TTCTTATGGA ACTAGACGAT AAGAAAAAGA TTGAGTGCGT TCTTTTGCCC
CAGAGCAGAG ACAAAAAGTC TAGCTATACC TTATGCCTTT CTACCCAGGT GGGGTGCCCC
ATAGCATGTA GTTTCTGTGC TACCGGCCAG TCCGGCTTTC AAAGGAACCT GAAGGCCTTT
GAAATAATAG GGCAGTATCT GGGGTCCAAG AAAGAATTGA GCAAGAGATT AAAGTCGCCC
CGGGCGGAGT TGATTAGTAA TGTTGTATAT ATGGGCATGG GCGAACCCCT GCTCAATTAT
GATGAGGTTA TTAAATCGGT TCATATGCTT AATGACCCCA GAGGAATTAA CCTGGGGCAG
AGGCGTATTA CTATTTCCAC CTCCGGAGAG GTAGCTGGAA TTAAAAAACT GGCCCAGGAG
AATATCCAGC TTACCCTGGC CATTTCTTTA CATGCCTGTG ATAACTCCTT GCGGGATCAA
TTAATTCCCT TAAACCGCAA ATACCCTCTG GAAGTTTTGT TCCCCGCCAT AGAGGATTAT
ATTGCTTTCA CCGGGCGTCG GGTAACCTTT GAATATCTAC TGCTGGATGA AGTAAATATG
AGCCGGAATG ATGCTAATAA AATGGTAAAA TTACTAAAAC CTTTACTAGC AAATCTTAAC
TTGATTCCTT ATAATGAAAT CGAAGGGTTA CCCTTCAAAA AACCCGAAAC AGCTAAAATA
TGGCAGTTCT ATCAGTGGCT ACAGGATGGT GGCTTAAATG TCAGTATCCG GGAAGAAAGA
GGTAGCGACA TAAATGCGGC CTGTGGACAA CTGCGTTCCG ACTATCGCAG GTAA
 
Protein sequence
MNSIEKKQLL GLDLNQMEEF LLGLEEPRFR GRQVYKWIYQ KECSSFYEMS DLPRSLRKKL 
DEKARVSIPR VLKQRVGKDG SRKFLMELDD KKKIECVLLP QSRDKKSSYT LCLSTQVGCP
IACSFCATGQ SGFQRNLKAF EIIGQYLGSK KELSKRLKSP RAELISNVVY MGMGEPLLNY
DEVIKSVHML NDPRGINLGQ RRITISTSGE VAGIKKLAQE NIQLTLAISL HACDNSLRDQ
LIPLNRKYPL EVLFPAIEDY IAFTGRRVTF EYLLLDEVNM SRNDANKMVK LLKPLLANLN
LIPYNEIEGL PFKKPETAKI WQFYQWLQDG GLNVSIREER GSDINAACGQ LRSDYRR