| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1196 |
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| Symbol | |
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| ID | 4282606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 1383528 |
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| End bp | 1385270 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638138069 |
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| Product | thiamine pyrophosphate enzyme |
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| Protein accession | YP_753876 |
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| Protein GI | 114566722 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00107007 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT TGATGATAGG CAATGAAGCT ATTGCCAGGG GAGCCTATGA AGCTGGTGCT
ACCGTGGCTA CCGCCTATCC CGGTACCCCC AGTACCGAAA TAGTCAGCAC ATTTGCCGAT
TATGAAGGCC TTTATGCCGA ATGGGCACCA AATGAGAAGG TAGCCCTGGA AGTAGGAGTG
GGGGCCTCTA TCGGCGGGGC ACGAACCCTG GTAGCTATGA AACATGTAGG AGTAAATGTG
GCGGCTGATC CTTTGTATAC CTTTTCTTAC ACCGGGGTAA ACGCTGGTCT AGTTCTGGTT
TCCGCTGATG ACCCGGGGAT GCATTCTTCG CAGAATGAAC AGGATAACCG GGGATATGGC
CGTTTTGCCA AAATGCCAGT AATAGAGCCA GCGGACAGCC AGGAAGCACT GGACTTTACC
CGCCGGGCCT ATGATATAAG TGAGGAATTT GACACCCCGG TAATGCTTAG GGTTACTACC
CGGCTTTCCC ATTCCCAGAC CCTGGTTGAG ACCGGAGAGC GGGTAGAAGT GGGTTTAAAA
GGCTATAAGA AAGATGCCCC CAAATATGTT ATGCTGCCTG GTTTTGCCCG CCTGCGCCAT
GTGGAAGTGG AAAAGCGTAT CCTGCAACTT AAAGAATATG CCGAAACTAC GGATCTAAAC
CGAATTGAAT GGGGAGATAA AAAGATAGGT ATAATCACCA GCGGAGTATG TTATCAGTAC
CTGCGTGAAG TAATGCCTGA AGTTTCCGTA TTAAAGCTCG GTATGGTCAA TCCATTGCCG
GAAAATTTAA TCCGCTCTTT CGCTGCCGAA GTAGACCGGC TTATTGTGCT CGAGGAATTG
GAGCCAGTAA TTGAGGAACA GCTAAAAGCC TGGGGCTTAA AGGTCGAAGG CAAAGAACTT
TTCACCCTTC TGGGTGAATA CAGCCCGGAA ATGATTGAAG AAGTCTTATT AGGAGTCAGT
TCCGGGAAAG GATTCGGTCT GGACAAGGAG ATACCTCCTC GCCCACCCTT GATGTGCCCG
GGCTGCCCGC ATCGCGGTGT ATTTCATACC CTGAAGAAAA TGAAGCTGCA TGTAATGGGG
GATATCGGCT GTTACACTCT GGGTGCTTTG AGTCCCCTGG ATGGAATGGA TGCCTGTGTT
TGCATGGGAG CCAGTATTGG TATGGCTCTG GGCATGGAGA AGGCCAATGG AGAGGACTTT
GCCCGCAAGG TGGTGGCGGT TATCGGGGAT TCCACCTTTG TTCATTCCGG AATTACGCCA
CTGATTGATA TTGTCTATAA CCAGGGAACC TCCACCGTTA TTATCCTGGA TAATGATACC
ACCGCCATGA CGGGACACCA GGATCATCCG GCTACCGGTA AAACCATCAG GAATCTACCT
ACCCGCAGGC TGGATTTACC AGCCCTGGTC CAGGCTATCG GTATAGAGCA TGTCCGCATA
GTGGACCCCT TGCAATTAGA CGAATTTCGC CAGACCCTGG AAGAGGAATT GAACCGCCGG
GAAGCTTCAG TAATTATTGC CAAGCGTCCC TGTGCGCTGC TGGTGAAGAA AGCTCCAGAT
AAAGAATTCT ATGTTGACCC GGAACTCTGT AAGAGCTGTA AACTTTGCAT AAAGATAGGT
TGTACCGGGA TTTATTGGGT AGAGGAAGAT AGAAAGGCCG TAATTAACCC CAATACCTGT
GTAGCCTGTG GCCTCTGTCC TCAGGTCTGT ACCTTTGATG CCATCAAGAT AGTGGAGGGA
TAA
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| Protein sequence | MKKLMIGNEA IARGAYEAGA TVATAYPGTP STEIVSTFAD YEGLYAEWAP NEKVALEVGV
GASIGGARTL VAMKHVGVNV AADPLYTFSY TGVNAGLVLV SADDPGMHSS QNEQDNRGYG
RFAKMPVIEP ADSQEALDFT RRAYDISEEF DTPVMLRVTT RLSHSQTLVE TGERVEVGLK
GYKKDAPKYV MLPGFARLRH VEVEKRILQL KEYAETTDLN RIEWGDKKIG IITSGVCYQY
LREVMPEVSV LKLGMVNPLP ENLIRSFAAE VDRLIVLEEL EPVIEEQLKA WGLKVEGKEL
FTLLGEYSPE MIEEVLLGVS SGKGFGLDKE IPPRPPLMCP GCPHRGVFHT LKKMKLHVMG
DIGCYTLGAL SPLDGMDACV CMGASIGMAL GMEKANGEDF ARKVVAVIGD STFVHSGITP
LIDIVYNQGT STVIILDNDT TAMTGHQDHP ATGKTIRNLP TRRLDLPALV QAIGIEHVRI
VDPLQLDEFR QTLEEELNRR EASVIIAKRP CALLVKKAPD KEFYVDPELC KSCKLCIKIG
CTGIYWVEED RKAVINPNTC VACGLCPQVC TFDAIKIVEG
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