Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1169 |
Symbol | |
ID | 4283744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 1353443 |
End bp | 1354597 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638138042 |
Product | peptidase S1 and S6, chymotrypsin/Hap |
Protein accession | YP_753849 |
Protein GI | 114566695 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACAA GAACTCGATC ATCAAAAGCA GTTAAATTAT TGCTGGTAAT GGTGTTGGCG GTAGTTATTG GAGGTGCCTA CCTGGTCTTT TGCAATTACT ATGCTGGTAA TGAAGGTAAA ATCCAGGCAC AAGCCACCAC CAATCAGACA GTAAATACTG TGGTTCTAGG GCCAAGCAGT GTTGCTGATA TGGTGGAAAA GGCCAGCCCA GCAGTAGTCA ACATTGAAAC CACTGTAGTA GGAAAAAGTT TTGGAGGCAA TGAGTTTTTC AATGATCCAT TCTTCCGGCA GTTTTTCGGC AATGATATAG TGATTCCCCG GCAGAATGAG CAGCATGGTA TCGGAACCGG TTTCATTATC AATGAAGAAG GCTATGTGAT AACCAACCAG CATGTAATAG ACGGGGCCAG TAATATAACC GTGAACCTCA ACGGGAATAA GAAATACCAA GCCAGAGTGG TAGGACAGGA TTATGATTTG GATCTGGCGG TTTTAAAGAT TGATGCCAAA GAGAAACTGG CCACCTTGAA GATGGGTGAT TCCGATGTAA TACGAGTGGG AGAATGGGTG GTGGCCATCG GTAATCCTTA CGGATTGGAT CATACCGTAA CTGCCGGAGT GGTCAGTGCC AAAGGTCGCC CCATTCAGAT TGAAAACCGG GTATACAAGA ATTTGATTCA GACTGACGCT GCTATAAATC CAGGTAATAG TGGGGGACCC CTTTTAAGTA CTAAAGGCGA AGTAATTGGG ATAAACACGG CGGTTGATGC ACAGGCACAG GGTATAGGTT TTGCCATTTC CATAAATACT GCCAAGGAAG TATTGGACGA GCTAATCAAT AAGGGTAAGG TGATTAGGCC CTACATAGGA GTATGGCTAC AACCGGTAGA TGAAAAGCTG GCCGGCTATC TTGGAGTCAA GCAAGCTGAA GGTATGGTAG TGGCTAATGT AGTGGCGGGT GGTCCCGCAG CTCAAGCAGG TTTAAAAAAA TATGATGTAA TTCTCAAGGT AGATAAGAAA ACTATCAATA ATTATGATGA ACTGCAGGAG ATATTGAAAA GCAAACGGGT GGGCGATAAA GTCCAGCTGG AGATTATCAG GAATCAAAAA CCTTTGCTGG TAACGGTTAA TCTGGCCGAA AAACCAAGCA GCTAA
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Protein sequence | METRTRSSKA VKLLLVMVLA VVIGGAYLVF CNYYAGNEGK IQAQATTNQT VNTVVLGPSS VADMVEKASP AVVNIETTVV GKSFGGNEFF NDPFFRQFFG NDIVIPRQNE QHGIGTGFII NEEGYVITNQ HVIDGASNIT VNLNGNKKYQ ARVVGQDYDL DLAVLKIDAK EKLATLKMGD SDVIRVGEWV VAIGNPYGLD HTVTAGVVSA KGRPIQIENR VYKNLIQTDA AINPGNSGGP LLSTKGEVIG INTAVDAQAQ GIGFAISINT AKEVLDELIN KGKVIRPYIG VWLQPVDEKL AGYLGVKQAE GMVVANVVAG GPAAQAGLKK YDVILKVDKK TINNYDELQE ILKSKRVGDK VQLEIIRNQK PLLVTVNLAE KPSS
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