Gene Swol_1161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1161 
Symbol 
ID4283736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1343790 
End bp1346534 
Gene Length2745 bp 
Protein Length914 aa 
Translation table11 
GC content44% 
IMG OID638138034 
Producthypothetical protein 
Protein accessionYP_753841 
Protein GI114566687 
COG category[S] Function unknown 
COG ID[COG1615] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.100714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAA CATCTAGTAC TACCAAACTG GTGATTTTTC TTGTAGTTTT GGGGCTAATA 
TCTTATCTTG CCAGCCTTTA TGTGGACTGG TTGTGGTTTA AATCAGTTAA CTTCCCGAGT
GTCTTTTCGA CCATTCTATT AAACAAGATA GGCCTGTATG TATTTATTTT CCTGGCTACA
GCTTTGCTTT TTGCTTTCAA CCTGCGTTTG ACCAGAAGGC ATATGGGGCC GGTGGAAGAA
CCTGTCTATG ATGACGAGGA AGGACGAGTT ATTTACCTGG ATGATGAAAA GACTCCCTGG
AAGGAATTCC TTCGGGGAAA ATCCTCCCGC TGGCTTTATT TGGGTATCAG TCTATTTGCA
GCTTACCTGG TAAGCTCGGT AGCTGTTGAT AACTGGATAG TAGTTCAACA ATATATTAAC
CGGGTACCCT TTGGAACTAC CGATCCTATC TTTAACAAGG ATTTGGGCTT CTATTTTTTC
AATTTGACAT TTTACAAGTT TGCTTACGGT ACCTTGATGA TGGCTCTGAT ATTATTAATT
ATTACCCTGG GCTCTATTTA TCTTATAAAT GCTTCAACAA ACCTTCTTTT TGGCAATTGG
AGACAGTTCA GCTTTGCCAA AGGTCACATG GCTACTTTAC TGGCAGCGAT ATTTTTGCTT
AAAGCCTGGG GTTACAAGCT AGCTGCCTAT GATATACTCT TTTCCCCGGC AGGTATTGTC
TATGGAGCCA CCTATAGCGA TATTTTTGCC CGTCTGCTCA GCTACCGCAT CCTCCTACTA
TTATCAATAA TCATTGCCGC CGTTATTCTG GCCAATATAT TTGTTAAAAA ATTCAAATGG
ATTTTAATAA GTTTGGGTGC CTGGGTGCTG GTAGCCGTTC TAATGGGAAG TGTATATCCT
TCACTTATTC AGAAATTAGT GGTACAGCCC AATGAGTTTA ACAAAGAAAA ACCCTATATT
GAAAACGCCA TTAAATACAC CCGCCAGGCC TACGGCTTGG ACCGGGCGGA AAACCGGGAG
TTTAATATTG ACTATAATCT GGATATTTCC GATCCCAGCC ATCAGAGCAC CATAGATAAT
ATTCGACTGT GGGACTGGCA GCCTCTGCGT ACCACTTACA AAAACCTGCA GCAACTAAGG
AGCTACTATG TTTTTGACGA TGTTGATATT GATCGCTACA CCGTAGATGG AGAGTACCGG
CAACTGATGC TTTCGGTGCG GGAGATAGAC CAGGAGGAAC TGCCCCAGCA GGCTAAAACT
TGGATAAACC AGCGCCTGAT GTATACGCAT GGCTATGGTT TAGTAGTTAG TCCAGTGACT
GAGGTGGCGG AGGAGGGATT TCCCCAGTTC TTTGTTAAGG ATATACCGCC ACGCTTTTCC
ACCGATTTAA AGATAGAACG ACCGGAAATA TATTTTGGAG AGAAAACCGA TAATTATGTG
ATAGTAAACA CCAGCCAAAA AGAATTTGAT TACCCAGCAG GGGAGAAGAA TGTATACACC
CGCTATGAGG GAAAGGACGG AATAAAGATT AAGTCTTTTG CCCGCCGCCT TCTTTTTGGT
TGGGTCTTAA AAGATTACAA GATGTTGTTG TCCTCGGATA TTACTAATGA GAGCCAGGTC
TTGATGAACC GCAATATTCT GGATCGAGTG CAAAAAGTAG CGCCTTATCT AAGCTATGAC
GGCGACCCTT ATATTGTAAT TAACGATGAT GGCAAGCTTT ACTGGGTTTT AGATGCCTAT
ACCGTATCTG ACAAGTATCC ATATTCAGAG CCTTTTGATA AGCAGCGTAA CAATTACCTG
CGCAATTCTG TAAAGGTAAT CTGTGATGCC TATACTGGAA AGATGAACTT TTATATTGCC
GATGAATCCG ATCCTATTAT AAAGACCTAT AGCCGGATAT TCCCCCAGGT ATACCAACCC
CTAAGTGCGA TGCCCGAGGG CTTGCGCAGC CATTTACGCT ATCCGGTGGA TATGTTTTCC
ATACAGGCGC AGATGTACCG GACTTTCCAT ATGACTGATC CGTCCGTATT TTACAATAAG
GAAGACCCCT GGTTAATACC CAACGAGACG GTTGAGGATA AGCAGGTTAA GATGGAGCCC
TATTACCTGG TAATGCGCTT GCCGGAAGAA GAAAACCCGG AATATATCTT GATGATGCCC
TTTACTCCCA AGAGCCGGGC CAATATGGTG GGCTGGATGT GTGCGCGTAT GGACGGGGAC
AATTATGGCA AGATGCTGGT CTATAATTTC CCCAAACAGG AAACCATATA TGGGCCCGAG
CAAATTGAAT CCAGAATCAA CCAGAATACA GAAATAGCCC AGCAGCTTAG CCTTTGGGAT
CAGAGAGGTT CCCGGGTATA TCGCGGTAAT CTGCTGGTTA TTCCCATGGG TAATTCCGTG
CTATATGTGG AGCCCCTGTA TCTTCAAGCG GAAAATAACC GCTTGCCGGA ACTAAAACGG
GTGATTGCCG CCTTTGAAAA CAAGGTGGTA ATGGAACCCT CACTTGATAC AGCTTTGCTT
AAATTATTCG GCCAGAACCA GCGCGTAGAA AGCCAGCAAA CAGGAGTAGT AGTTACCCCG
GGGGAACTTC CCGGAGCTAC AGTAGCTGAA CTGGCCAAAT CAGCCCGGGA ATACTATGAC
CGGGCCAACC AGCTGTTGCG GGATGGTGAC TGGGCTGGAT ATGGGGAGAA TATCAAGAAG
CTTAATGAAA CCATCAGCCG CCTGGAGGAA GCAGCAAAAC CATAA
 
Protein sequence
MQKTSSTTKL VIFLVVLGLI SYLASLYVDW LWFKSVNFPS VFSTILLNKI GLYVFIFLAT 
ALLFAFNLRL TRRHMGPVEE PVYDDEEGRV IYLDDEKTPW KEFLRGKSSR WLYLGISLFA
AYLVSSVAVD NWIVVQQYIN RVPFGTTDPI FNKDLGFYFF NLTFYKFAYG TLMMALILLI
ITLGSIYLIN ASTNLLFGNW RQFSFAKGHM ATLLAAIFLL KAWGYKLAAY DILFSPAGIV
YGATYSDIFA RLLSYRILLL LSIIIAAVIL ANIFVKKFKW ILISLGAWVL VAVLMGSVYP
SLIQKLVVQP NEFNKEKPYI ENAIKYTRQA YGLDRAENRE FNIDYNLDIS DPSHQSTIDN
IRLWDWQPLR TTYKNLQQLR SYYVFDDVDI DRYTVDGEYR QLMLSVREID QEELPQQAKT
WINQRLMYTH GYGLVVSPVT EVAEEGFPQF FVKDIPPRFS TDLKIERPEI YFGEKTDNYV
IVNTSQKEFD YPAGEKNVYT RYEGKDGIKI KSFARRLLFG WVLKDYKMLL SSDITNESQV
LMNRNILDRV QKVAPYLSYD GDPYIVINDD GKLYWVLDAY TVSDKYPYSE PFDKQRNNYL
RNSVKVICDA YTGKMNFYIA DESDPIIKTY SRIFPQVYQP LSAMPEGLRS HLRYPVDMFS
IQAQMYRTFH MTDPSVFYNK EDPWLIPNET VEDKQVKMEP YYLVMRLPEE ENPEYILMMP
FTPKSRANMV GWMCARMDGD NYGKMLVYNF PKQETIYGPE QIESRINQNT EIAQQLSLWD
QRGSRVYRGN LLVIPMGNSV LYVEPLYLQA ENNRLPELKR VIAAFENKVV MEPSLDTALL
KLFGQNQRVE SQQTGVVVTP GELPGATVAE LAKSAREYYD RANQLLRDGD WAGYGENIKK
LNETISRLEE AAKP