| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1144 |
|---|
| Symbol | |
|---|
| ID | 4281451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 1323440 |
|---|
| End bp | 1325212 |
|---|
| Gene Length | 1773 bp |
|---|
| Protein Length | 590 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638138017 |
|---|
| Product | long-chain-acyl-CoA synthetase |
|---|
| Protein accession | YP_753825 |
|---|
| Protein GI | 114566671 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.036593 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAACCATA ACCATTTTGA GGCTATGCAT TTAAAAATAA TCGAGAGCTT GAAGAAACCT
CAGGCATTAT CCCTGAGTTG GCAATTAGAG AACTGGGCCG CCCAACAAGG CGAAAAAACT
GCTCTGATAT ATGGTGACCG CTATATCAGC TACGAGCAGT TTAACCAGAT GGCCAATCGT
TATGCCCATT TCTTTCAGCA AGAGGGATTT AAAAAGGGTG ATGTGGTTTC ATTACTGATG
GATAACCGGC CGGAATATTT AATGGCGGCC AGTGGTTTAA ATAAATTGGG TGTCGTGGTG
AACCTGGTAA ATACGGTTAT TCGCGGGGAA CGGCTGGCTC ATGCCATTAA TGTCAGTGAG
TCCCGAGCGA TTATCGTTGG TCATGAATTT CTGGAACTCT ACCAGTCGAT AAGCAATGGA
ATCCGGCTGA GAACTCCCGG ACGCATACTG GTGGAAACTG GGGAGCAGAA TATTAGCTTG
CCGCTTGCTG TGGAGGATTT GAATCAACTA CTGTCCGGCT GTCCCACTCA TAATCCGGAA
AGCACCGGAA AATCTAGCAG TGAAGATATT ATAATATACA TGGAGACAGC AGGGAGCAGT
GGACTGCGCA AAACAGTAGT ACTGTCCCAA AAAAGATGGC TGCTCATGGG TCAGCAGTTT
GCTCTGCTGA CTAATATGAA TCAGCATTCT ATTATTTATT TAGTAATACC ATTCTACTAT
AATATGGGAT TTAATATCTG CTTTTCCAGT ATGCTGGCGG CCGGCGCCAG CATGGTAATA
AAACCACGCT TTTCGTTGAG CAATTTCTGG CCGGACATTC GCCGTTATAA GGTTACGCAC
TTTATGGCGG TGGGGGAAAT GTTGCGCTTT ATTTGCAATC AGCCGGAAGA AGCCGATGAT
GGGGATAATC CTTTGGAATA TATTATAGGG GTCAATACCC GTGGTGATCT CCTGCAGCAA
CTGCAGCAGC GTTTTGGGAT TAAGAAGGTT GTTGAGGCTT ATGGTACTTC CGAAGGCATA
GGAACCTATA TAAATGAGGA TGAGATCCCC GGTATGTGCG GCAATCTTAA TCTGAGAGGT
ATGCGGCAGG GGGAAGTGGT AAAGTATGAC TATGACAGTG ACAGCATAAT TCGAGACGAT
AAAGGACTGG CAGTAGTATG TAAGCCGGGT GAGATTGGAC TCGTTCTTTC GGAAATAAAT
GCTAATAACC AATTTTGGGG CTATGTTAAT GATAGCGAGA TGAGTGAAGC CAGAATTATC
CGCGATGTAC TGCAAAAAGG GGACGAATAC TTTAACACGG GTGATTTGGT AAAACTTCAT
GAGGGGGATT ATATATCCTT TGTTGATCGT TTGGGTGATA CTTACCGTTG GAAAAGTAAA
ACCGTTTCGG CTAATCAGGT AGCAGATGTT ATAAATAAAT TCTTTGGCAG TATTGAAGAA
GCCTTTGTTT ATGGAGTAAA GGTTCCCGGT ATGGAGGGAA ACTGTGGAAT GGCCGCTCTG
CAATTGCTGG ATGATGCACC TCTGGATTGG GATAAATTAG TGGATCATAT CAATCGCAGA
ATGCCTGACC ATGCCCGCCC AGTATTTATC CGTATTTGTG CTCATGTGGA ACCCAGGTTG
TTTCGGAAAA AAAGGCGGCA ACTACAGGAG GAAGGCTTTA ACCCAACTGT AGTCAAAGAT
CCTCTTTACT ATTTCGATCT CAAGCGTAAT GCTTATCTTA CTTTAACTCC AGAAAAATAT
CAGGATATTA AGGATGGCAA AATTCGCTTG TAA
|
|---|
| Protein sequence | MNHNHFEAMH LKIIESLKKP QALSLSWQLE NWAAQQGEKT ALIYGDRYIS YEQFNQMANR
YAHFFQQEGF KKGDVVSLLM DNRPEYLMAA SGLNKLGVVV NLVNTVIRGE RLAHAINVSE
SRAIIVGHEF LELYQSISNG IRLRTPGRIL VETGEQNISL PLAVEDLNQL LSGCPTHNPE
STGKSSSEDI IIYMETAGSS GLRKTVVLSQ KRWLLMGQQF ALLTNMNQHS IIYLVIPFYY
NMGFNICFSS MLAAGASMVI KPRFSLSNFW PDIRRYKVTH FMAVGEMLRF ICNQPEEADD
GDNPLEYIIG VNTRGDLLQQ LQQRFGIKKV VEAYGTSEGI GTYINEDEIP GMCGNLNLRG
MRQGEVVKYD YDSDSIIRDD KGLAVVCKPG EIGLVLSEIN ANNQFWGYVN DSEMSEARII
RDVLQKGDEY FNTGDLVKLH EGDYISFVDR LGDTYRWKSK TVSANQVADV INKFFGSIEE
AFVYGVKVPG MEGNCGMAAL QLLDDAPLDW DKLVDHINRR MPDHARPVFI RICAHVEPRL
FRKKRRQLQE EGFNPTVVKD PLYYFDLKRN AYLTLTPEKY QDIKDGKIRL
|
|---|
| |