| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1124 |
|---|
| Symbol | |
|---|
| ID | 4282960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 1300132 |
|---|
| End bp | 1301043 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638137996 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_753805 |
|---|
| Protein GI | 114566651 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3285] Predicted eukaryotic-type DNA primase |
|---|
| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02778] DNA polymerase LigD, polymerase domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGAAT CAGCAACGAT AGCTATGGCG GGAAGAGAGA TTAAGCTTAC TAATCTGGAC
CGGGTTCTTT GGCCGGAAGA CGGCTATTGC AAAAGAGATT TAGTGGAATA CTATACTGCG
ATTTTTCCCT ATATGCTTCC TCATCTAAGC GAGCGTCCGC TGGTCTTCAC CCGCTATCCG
CGGGGAATTG GAGAAAAATC ATTTTATCAA AAAAACGCCC CGGAAGGCCT TCCGCAGTGG
ATAAAAACTT TTACCTGGGC TGGCAGTGAT GGCGATAGCA AAAACTATGT CCTGGTGCAG
CAAACGGTAG ATCTTATGTG GCTGGCCAAT CTCGCCTGCA TTGAAATTCA TCCCTGGTTA
TCGCAAATCA ATAGTATTGA ATATCCCGAT TTTATAGTAT TTGACCTGGA CCCTTCAGAG
CAGAGTACCT TTGAGCAAGT TATTAGCGTG GCCCGCCTGC TGCATGAATT AATGGATAGT
CTAAGTCTCC GGGTGTATCC CAAAACTTCA GGGGCAAAAG GGCTTCACCT TTACCTCCCC
ATAGCCGAGG GTTTTACCTA TAGTCAAATA CGCCGTGTGG CCCAGGCGAT GGCGGAGATG
GTTTGCCAGG TGATCCCTGA TATAGCTACC ACCGAAAGAG CTCTAAAACA TCGGGGGCCT
CGGGTTTACC TGGATTACCT GCAAAACGGC CTGGGTAAAA CTGTCTGCGC TGCTTACAGC
GTTCGTCCTC ATAAGGGGGC CCCCTGTTCC ACCCCTATTG AGTGGCAGGA ACTTGAGTCC
ATAAGACCGG ATCAATTTAC GATTAAAACC TTACCGGAGC GACTTCAGCA GGTAGGAGAT
TTATTCGCTG ATGTTCTAAA CGACCGCCAG GATCTAAAAA AAGCCATGGC AACATTGGGG
GTTTCCAGGT AA
|
|---|
| Protein sequence | MGESATIAMA GREIKLTNLD RVLWPEDGYC KRDLVEYYTA IFPYMLPHLS ERPLVFTRYP
RGIGEKSFYQ KNAPEGLPQW IKTFTWAGSD GDSKNYVLVQ QTVDLMWLAN LACIEIHPWL
SQINSIEYPD FIVFDLDPSE QSTFEQVISV ARLLHELMDS LSLRVYPKTS GAKGLHLYLP
IAEGFTYSQI RRVAQAMAEM VCQVIPDIAT TERALKHRGP RVYLDYLQNG LGKTVCAAYS
VRPHKGAPCS TPIEWQELES IRPDQFTIKT LPERLQQVGD LFADVLNDRQ DLKKAMATLG
VSR
|
|---|
| |