Gene Swol_1121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1121 
Symbol 
ID4282957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1296367 
End bp1297635 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content42% 
IMG OID638137993 
Productlysine 2,3-aminomutase 
Protein accessionYP_753802 
Protein GI114566648 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1509] Lysine 2,3-aminomutase 
TIGRFAM ID[TIGR00238] KamA family protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTGTTAA GAGAAGATTT GATAAACGAA GAAATTCGGG AGATGAAACG CGAAGTATCT 
TTACGTAGGG CGGATGAGCT CAAACAGGAA ATTTCTGACT ATCTTGATAT CGAATCTACT
ATTGAAACGG GAATGCGATT ACATGAACGT AATCTGCACA ATAAGGAACA TATCCTGAAA
TACTTTGAGG TCAGCGAGAA TGATTGGGAT AATTGGGCCT GGCAAATGAG GAATCGCATC
AATGATGGAA ATGTGCTGGC TTCCATTCTG GGCTTAAATG AATTCGAAGT GCAGACAATT
AAAAGGGTTT CCAAAAAAGT CCGCTGGGCT ATTTCTCCCT ATTATCTTAG TTTAATCGAT
TTTGAAAATT ACGCGGCGTC ACCCATTTAC AAGCAGTCTG TCCCCAGTCT GCATGAAATA
ATAGAATGTA AGGGTGAGGA TGACCCCATG GGAGAAGAGA TGAGTAGTCC TGCTCCCCGT
ATTACACGTC GTTATCCCGA CCGACTTATA ATCAATGTTA CCAATCAATG TGCTATGTAC
TGCCGCCATT GTCAGCGCCG TAGAAATTTC GGTGAAACTG ATAACCATGC CGCCCATAAA
GACCTGGAAG CTGCCCTGCA GTACATTAAA AACAATTCTG AAATACGGGA TGTTCTTATT
ACCGGTGGGG ATGCTCTAAT GCTTAGCGAT CGTACACTTG ACTGGTTACT GGGAGAACTC
GATGCCATTT CACATGTTGA AATTAAGCGT ATTGGTACCA GGACACCGGT AACACTTCCA
CAAAGAATAA CCGCCAATCT TTGTGCAGTG CTAAAAAGGC ATACACCCAT ATATATTAAT
ACCCAATTTA ATTCACCGCT GGAAGTTACT CCGGAAGCCA AACAGGCCTG TGATCGGCTT
ATTGAAGCAG GAGTAGTATT GGGTAACCAG GCTGTTCTGC TAAAGGGAAT CAACGATAAT
GTCCATGTTA TGAAAAAACT TAACCAGGAG TTGCTGAAAA TCCGGGTTCG CCCCTACTAT
TTATTCCAGG CCAAAGAGGT AAAAGGAACT ACCCATTTTA TTAGCCCGGT CAATACCGGC
CTGGATATTA TGAAGCATTT ACGGGGCTAT ACTTCTGGCC TGGCCATCCC CACTTATGTT
ATCAACGCAC CAGGAGGTTA CGGTAAAACT CCAGTTAACC CGGAATATGT ACTGGATATT
AATGAAAATG AAGTTATAAT TAGTACCTGG CAGGGTAAAA CTTTTAACTA TCCCCATCGT
AACAATTAG
 
Protein sequence
MLLREDLINE EIREMKREVS LRRADELKQE ISDYLDIEST IETGMRLHER NLHNKEHILK 
YFEVSENDWD NWAWQMRNRI NDGNVLASIL GLNEFEVQTI KRVSKKVRWA ISPYYLSLID
FENYAASPIY KQSVPSLHEI IECKGEDDPM GEEMSSPAPR ITRRYPDRLI INVTNQCAMY
CRHCQRRRNF GETDNHAAHK DLEAALQYIK NNSEIRDVLI TGGDALMLSD RTLDWLLGEL
DAISHVEIKR IGTRTPVTLP QRITANLCAV LKRHTPIYIN TQFNSPLEVT PEAKQACDRL
IEAGVVLGNQ AVLLKGINDN VHVMKKLNQE LLKIRVRPYY LFQAKEVKGT THFISPVNTG
LDIMKHLRGY TSGLAIPTYV INAPGGYGKT PVNPEYVLDI NENEVIISTW QGKTFNYPHR
NN