Gene Swol_1109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1109 
Symbol 
ID4283644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1278154 
End bp1280541 
Gene Length2388 bp 
Protein Length795 aa 
Translation table11 
GC content48% 
IMG OID638137979 
Productpeptidoglycan glycosyltransferase 
Protein accessionYP_753790 
Protein GI114566636 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.6818e-05 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAGCA AAGAGAAAAA AAACAAACGA GCAAAAAGAC GCAGTTATAG CTGGTTGAGT 
ACCCTGCTAT TAATTTTTTT GGTTGCTGCC GGTGTGGGGG TAGGCGTTTT AGTTTATGCT
GCGCAAAATC TTCCCGCCTG GGATCCGCAA CAGCTTTCCG GTGCCAGCAC TACTTTTTTA
TATGATGACC AGGGAAAAGT CCTGGCGGGA TTGCATGCCG AACAAAATCG AACTGAAACC
AGCCTGAATA ATGTTCCTCC CGATTTGATC AATGCCTTTA TCGCTACTGA GGATCAGGAT
TTCTACCGCC ATCACGGGGT TAACTTTAAG GGAATAGTAC GAGCGTTGCT GGTTAATCTT
CAATCAGGCG ATTTGACGGG ACAGGGGGCC AGTACTATAA CCCAGCAGTT GGCCCGCAAC
GCTTTTCTCA CCTTTGACAA GCAATGGGAA AGGAAAATCA AGGAAGTTCT GCTGGCTTTC
AAACTGGAAA CCCATTATTC CAAAGATGAA ATCTTGAGCA TGTATCTTAA TAAAATCTAC
TTTGGCGCCG GTGCCTACGG GGTACAGGCA GCAGCCAACA CCTATTTCGG CAAAGATGTA
AGCAAATTGG ACCTGGCCGA GTCCTCATTG CTGGCAGGTT TGCCGCAAAG TCCCAACTCC
TATAACCCGT TCCAGTATTA TGACCGGGCT AAAGCCAGGC AGCAAATGGT TCTAAAATGT
ATGGTAGATT GCAATTATAT TGACCAAGAA ACTGCCCAGC AGGCTTTTGA AACTCCCCTG
GTTTTTAAGA AATCATTTAA TTCCGGAAGC AGGTATGGCT ATTTTATTGA CGCGGTAATA
GATGAAACCC TGGATATCCT GGAAGCGCGC GAAATTTATG AAGATCCGAA TAATGCCATT
TATCGTTCGG GGCTTAAAAT CTATACCACC ATGAATGCCC AGCTGGAAAG CCATGCCGAA
GAGTTCTTTA AGAACCCGGC CAATTTCCCC TCGGAACAGA AAAACGGAGA GCAGATTCAA
TGTGCCATGG CTCTAATCGA TCATAGCAAC GGGGAAGTAA AAGCTATCAT GGGTGGTCGT
TCCTATGAAC AGCGAAGGGG ATTTAATCGG GCCACCAATG CCTTGCGGCA ACCAGGGTCT
TCGATTAAAC CCTTGACGGT ATATGCTCCG GCACTGGAAG ACGGCTATAT GCCCTTCTTT
ACCCTTATAG ATGAACCGAT TTCCATTAAG GTAGGAAACA CTATTTGGAG CCCGAAGAAC
TATGACCCCA ACTATCGTGG TTTGATAAGC ATGAGGACTG CAGTACAGTG GTCAGTCAAT
ACCTATGCGG TACAATTATT GGAAAAAGTT GGGGTAAGAA AGTCTTTTGA TTTTGGCAAA
TCCCTGGGGC TTGATCTGGT GGATACGCCG GGTACGAATG ATTTGAGCCT GGCTCCCCTT
TCTCTGGGCG GCCTGACCCG TGGAGCATCA CCTGTACAGA TGGCCGCCGC TTATGGTGCC
TTTGGCAACG GAGGTTTATA TGCCAAACCC CATTTTGTAA CCCGTATTCT TGATGCCGAT
GGAGTGGAAA TCTACCGCTT CAAACCGGAT TATCACCGGG CCATGTCCGA AGAAACCGCC
TGGTTGATGA ACAGCATGCT GCAAACCGTA GTCAGCTCTG GTACCGGCAC CAATGCCCGG
GTCCCTGGCG TACAGACCGG GGGTAAGACC GGCACCTCAG AAGAATATAA GGATTCCTGG
TTTTGCGGCG TCACTCCCGG CTATTCTGCT GCCATATGGA TGGGCTATGA CCGGGAGCAT
ACTATGAACA AGGTATATGG CGGCAGTTAC CCGGCCCGTA TGTTCCGCTC CATGATGCAA
AAGGCCCATG AAATTAAAAA TCCCAAGCCG CGTTCTATGC CTGCTGGAAT AGTATCAGTG
TCGGTGTGCT CGAAATCGGG CAAGCTTCCC GCTGAACTCT GCTCGCAGGA ACAAATCTTT
TCCGACTATT GTCTTAAAAA TAAGGTTCCG ACAGAAATCT GTGATGCGCA CAATATGGTT
TCCATTTGCC CGGAATCAGG AAAACTGGCT GGTCGCTACT GCCCTAATCC CGAAATGCGT
TCCTTGACCA AGGATGAAAC TCCTACGGAA AAATGCGATA TTCACAGCGA TTTTTCCCTG
CCTGCTTTAT TGAACAACGA AATTTATGTC TGCCGTGACC CTCGGCATAA TGGGAAAATA
TACCGGGCCA ACCTGCCCAA TCCTTTACAA TCAGGGGGTT GCCCTCCGGA GTATCTGGAA
AAAGTCATAG TGGAGAACGG GGATAGTCTT CCCTATTGCT CGCTGGAAGA TCACCAGTTA
AAGAAAAAGA AAGCCCGTGA AGTATTCGAT GATGTGATCG GGCTATAG
 
Protein sequence
MTSKEKKNKR AKRRSYSWLS TLLLIFLVAA GVGVGVLVYA AQNLPAWDPQ QLSGASTTFL 
YDDQGKVLAG LHAEQNRTET SLNNVPPDLI NAFIATEDQD FYRHHGVNFK GIVRALLVNL
QSGDLTGQGA STITQQLARN AFLTFDKQWE RKIKEVLLAF KLETHYSKDE ILSMYLNKIY
FGAGAYGVQA AANTYFGKDV SKLDLAESSL LAGLPQSPNS YNPFQYYDRA KARQQMVLKC
MVDCNYIDQE TAQQAFETPL VFKKSFNSGS RYGYFIDAVI DETLDILEAR EIYEDPNNAI
YRSGLKIYTT MNAQLESHAE EFFKNPANFP SEQKNGEQIQ CAMALIDHSN GEVKAIMGGR
SYEQRRGFNR ATNALRQPGS SIKPLTVYAP ALEDGYMPFF TLIDEPISIK VGNTIWSPKN
YDPNYRGLIS MRTAVQWSVN TYAVQLLEKV GVRKSFDFGK SLGLDLVDTP GTNDLSLAPL
SLGGLTRGAS PVQMAAAYGA FGNGGLYAKP HFVTRILDAD GVEIYRFKPD YHRAMSEETA
WLMNSMLQTV VSSGTGTNAR VPGVQTGGKT GTSEEYKDSW FCGVTPGYSA AIWMGYDREH
TMNKVYGGSY PARMFRSMMQ KAHEIKNPKP RSMPAGIVSV SVCSKSGKLP AELCSQEQIF
SDYCLKNKVP TEICDAHNMV SICPESGKLA GRYCPNPEMR SLTKDETPTE KCDIHSDFSL
PALLNNEIYV CRDPRHNGKI YRANLPNPLQ SGGCPPEYLE KVIVENGDSL PYCSLEDHQL
KKKKAREVFD DVIGL