Gene Swol_1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1100 
Symbol 
ID4283635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp1266459 
End bp1266983 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content48% 
IMG OID638137970 
Productsoluble lytic murein transglycosylase and related regulatory protein 
Protein accessionYP_753781 
Protein GI114566627 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATCT TCACCAATCT CTTCAAGGAA ATAAGCTTCA TGAAACTCCT GAAAGCCCTG 
GAAGACGGCC TTGCTTCCAC CGGTCGCGCC CTGAGCGGCA GCAAAACACC CGATATATCA 
ACTTCCTCAG CAAGCAGCAA GAGCCGCCCT TTCAGCGAGA TTATAAAAGA AGCCAGCCAG 
GCTTATGGTA TTCAGGAAGA AGTAATTAGT GCCGTAATAA AACAAGAGTC ATCTTACAAT 
CCCCGGGCGG TTTCTTCCTG TGGTGCCCAG GGTCTCATGC AGTTGATGCC AGGCACAGCT 
AGAAGCCTGG GGGTAAGGGA TGCCTTTAAT CCGGAAGAGA ATATTATGGC GGGAACCCGC 
TATTTGAAAG AAAAGCTGAA CGAATTCAAT GGCAGCCTGC CGCTGGCCCT GGCAGCATAC 
AATGCCGGCA GTGGAGCAGT TAAGAAATAT GGAGGTATTC CCCCTTATAA AGAAACTCAG 
GCTTATGTTA ATAAGATAAT CAAGTCTATC GACCACCTGG CCTAA
 
Protein sequence
MNIFTNLFKE ISFMKLLKAL EDGLASTGRA LSGSKTPDIS TSSASSKSRP FSEIIKEASQ 
AYGIQEEVIS AVIKQESSYN PRAVSSCGAQ GLMQLMPGTA RSLGVRDAFN PEENIMAGTR 
YLKEKLNEFN GSLPLALAAY NAGSGAVKKY GGIPPYKETQ AYVNKIIKSI DHLA