Gene Swol_1072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1072 
Symbol 
ID4281561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1220659 
End bp1221381 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content47% 
IMG OID638137941 
Productglutamine ABC transporter, ATP-binding protein 
Protein accessionYP_753753 
Protein GI114566599 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.244358 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACGG TAAAGAATCT ATATAAGAGC TTTGGTCTTC TCCAGGTGCT AAAGGGTATT 
AATTGCCACA TCTCCCCCCA GGAGGTAGTA TGTATTATTG GCCCCAGTGG TTCGGGGAAG
AGTACCCTTT TACGCTGTGT AAATCAACTG GAAACACCTG ATTCCGGTAC GGTAACTATA
GATGGTATTG AATTAACATC GCCTCATACC GACATAAACA AAGTACGGCA GCAAGTAGGA
ATGGTCTTTC AACATTTTAA TCTCTTTCCC CACCGGACTA CGCTGGAGAA TATTACCATG
GCCCCGGTGA TAATTAAAAA AACCGATAAA GCAGAGGCCG CGCGCATAGC CCGGGAGTTG
CTTCGAAAAG TAGGGCTTTT CGATAAGGAT GATGTATACC CGGCTCAGTT ATCTGGCGGG
CAGAAACAGC GCGTAGCTAT AGCCAGGTCG CTGGCTATGC AGCCCAAAGT CATGTTATTT
GATGAACCCA CTTCCGCTCT GGATCCGGAA ATGGTCGGGG AAGTTCTGGA GGTAATGAAG
GACCTGGCCC GGGAAGGCAT GACCATGATG GTAGTAACCC ACGAGATGGG ATTTGCCCGG
GAGGTAGGAC AGCGGGTTCT TTTTATGGAT GAAGGACTGA TTGTAGAAGA AAACTCCCCT
CAACAGATAT TTGAGAACCC TACAAATTCT AGAACAAAAG CCTTTCTCAG CAAAGTGTTA
TAA
 
Protein sequence
MITVKNLYKS FGLLQVLKGI NCHISPQEVV CIIGPSGSGK STLLRCVNQL ETPDSGTVTI 
DGIELTSPHT DINKVRQQVG MVFQHFNLFP HRTTLENITM APVIIKKTDK AEAARIAREL
LRKVGLFDKD DVYPAQLSGG QKQRVAIARS LAMQPKVMLF DEPTSALDPE MVGEVLEVMK
DLAREGMTMM VVTHEMGFAR EVGQRVLFMD EGLIVEENSP QQIFENPTNS RTKAFLSKVL