| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1040 |
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| Symbol | |
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| ID | 4281686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 1183050 |
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| End bp | 1185140 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638137912 |
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| Product | Signal transduction histidine kinase regulating C4-dicarboxylate transport system-like protein |
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| Protein accession | YP_753724 |
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| Protein GI | 114566570 |
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| COG category | [R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system
[COG4624] Iron only hydrogenase large subunit, C-terminal domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACTT TCATAGAAGT AATTGGCATT AAAGAAGAGA ACTGTATCAA CTGCCACCAG
TGTATTGCGG TTTGCCCGGT TAAGATTTGC AGTGATGGAA GCGGGAATGT GGTAAAATTC
CATAACCATC TCTGTATCGG ATGCGGTCGC TGTATAGAGG CTTGTATTAA AAGTCATGGA
GGTAATGTTG AGAAAAGTGC CCGCTTTCCC ATTGATGACG CCGATGATTT TTTAAATGAT
TTAGATAGCA GTGAAGTAAT AGCTCTAGTC GCTCCCTCGG CCCAGGCCAA TTTTAACCTT
AAGAAGCTAA TAAGCGCGCT TAAACTTTTG GGAGTTAAGG CGGTTTATGA TGTTTCGCTG
GGAGCAGAAA TATCTATTTA TTCTTATCAT AAGGCCATAA AATCTGGAAA AGCGAAGCTT
CCCCTGATTG CTCAGCCCTG CCCGGCTATA GTCAGATACA TAGAACTGAA TCACCCGGCC
TTGATTCCCC ACCTGGCTCC GGTAGGCAGC CCGGTACACA ATATTGCTGT CTATGCTAAA
ACCTTGCACC CGGAAGCGAA GTTGGCCTTT ATTTCCCCCT GCCTGGCCAA GAAACGGGAA
TTTCATGATA GTCAAAGCGT TGAATACAAT GTAATATTTC AATCATTATC ACGGATATTA
GCTGAAAAGG ATATAAATAT CGACTTGCTT GAGGAAAGTG AGTTTGATAA TTACATCTCC
GCTGGAATTG CGACCAATTT TTCTACTCCC GGGGGACTGA AGGAAGCCTA CCTTTTCCAT
TATCCGGAAA CACTACCTAG CAGCATCTCC AAAATTGAAG GTTCCCTGGT TTACGAAAAA
TACCTTAAAG ATCTGGAAAA GGCTATAAAG GAGGGACAAG CTGATCTTCC CCTGATTATT
GATATACTGG CCTGTGAAAA AGGCTGTAAT ATGGGTGCAG GTTGCATCAA CCAGGGGCAA
TCCATTACCC AAATTGAAAG AGCCGTCAAC CGCCGAACGG AATTTAGCAG CAGTGACGCA
GAAAAAACTA TAAAGTTAAT AGAATTTCTT GATAAAATCA CGCAGGATTT AGACTTTTCT
TACACCTTTT ATAGTAATCT GTCTGCAAAT AACGATATTA TTATCCCCAG TGAACTGCAA
TTACAGCAGG TATATAAACG TATGTACAAG GAAGTGGAAA AGGATTATCG CAACTGCCTG
GCCTGCGGCT ACAATTCCTG CTACCAAATG GCGGTTGCAG TTTTTAATGG TTTAAACAAA
GCGGAAAATT GCCATCTCTA TCAAGAAAAA GAATTATTAA GGGAGCAGGA GATCCTTAAT
AATATGGTTG ATGAACTGGC TACTCTCAAT TCTAAGCTGG AAGAAGAAAT GTCGGAAAGA
AAGCAGCAAG AGCAATTGCT GGTACAAAAC TCCAAACTGG CAGCTATGGG GGAAATGATA
GGTATGATTG CCCACCAATG GCGGCAACCA CTATCCTCTA TAAGCACCCT GGCAGGAAAT
CTTAAAGTTT ACCTGGATCT TGATATGTAT GAAAAGAATC AATTTCTCTC TTTACTTGAA
GAGATCAACC ACCATGCCCA GTATTTGTCC AGTACCATAA ACGATTTTCG GCACTTTTTT
AAGCCGGATA ATCCTCAGGA TACGGTATAT CTTAATGTCG TAATTGACAA TACCCTGGGC
ATAATCGGTA AATCATTGGA ATACAAAAAT GTACAGTTGA ATATTAACAC CTCTTTTTCC
CAACCTATTT TAACTTATCC CAATGAGCTT ATGCAGGTAT TTCTTAATAT CCTTAAAAAT
GCCTCCGATG CCTTTGTTGA TAATGAAACC AGCTATCCCC GGATACAGAT AAATGGCTAT
GAAAAAAACA ACTATCAAAT AGTAGAAATT ATTGATAATG CCGGAGGTAT ACCCGAACGA
ATACTTAATA AAATATTTGA TCCCTATTTT TCTACCAAGG GACCCGGAAT AGGAACCGGG
CTAGGACTCT ATATGTCGAA AACCATAGTG GAAGAACATT GCATGGGAGA ACTCATTGCC
CGTAATACGC AGGAGGGAGC TTGCTTTACC CTCAAGTTTC CACTTCGCTA A
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| Protein sequence | MNTFIEVIGI KEENCINCHQ CIAVCPVKIC SDGSGNVVKF HNHLCIGCGR CIEACIKSHG
GNVEKSARFP IDDADDFLND LDSSEVIALV APSAQANFNL KKLISALKLL GVKAVYDVSL
GAEISIYSYH KAIKSGKAKL PLIAQPCPAI VRYIELNHPA LIPHLAPVGS PVHNIAVYAK
TLHPEAKLAF ISPCLAKKRE FHDSQSVEYN VIFQSLSRIL AEKDINIDLL EESEFDNYIS
AGIATNFSTP GGLKEAYLFH YPETLPSSIS KIEGSLVYEK YLKDLEKAIK EGQADLPLII
DILACEKGCN MGAGCINQGQ SITQIERAVN RRTEFSSSDA EKTIKLIEFL DKITQDLDFS
YTFYSNLSAN NDIIIPSELQ LQQVYKRMYK EVEKDYRNCL ACGYNSCYQM AVAVFNGLNK
AENCHLYQEK ELLREQEILN NMVDELATLN SKLEEEMSER KQQEQLLVQN SKLAAMGEMI
GMIAHQWRQP LSSISTLAGN LKVYLDLDMY EKNQFLSLLE EINHHAQYLS STINDFRHFF
KPDNPQDTVY LNVVIDNTLG IIGKSLEYKN VQLNINTSFS QPILTYPNEL MQVFLNILKN
ASDAFVDNET SYPRIQINGY EKNNYQIVEI IDNAGGIPER ILNKIFDPYF STKGPGIGTG
LGLYMSKTIV EEHCMGELIA RNTQEGACFT LKFPLR
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