Gene Swol_0999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0999 
Symbol 
ID4283705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1135043 
End bp1137082 
Gene Length2040 bp 
Protein Length679 aa 
Translation table11 
GC content42% 
IMG OID638137872 
ProductATP-dependent protease La 
Protein accessionYP_753684 
Protein GI114566530 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4930] Predicted ATP-dependent Lon-type protease 
TIGRFAM ID[TIGR02688] conserved hypothetical protein TIGR02688
[TIGR02653] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.48984 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGATA ATTTGGACAA AAAGGCTTTA GAACATTTTC GGGGATATGT AGTAAGAAAA 
GATTTGGCTC CTTTAATAAA GGGCGGTGCC AATGTGCCTA CTTTCGTACT GGAATATTTG
CTGGCCAATA CCTGCAGTAC GGAAGATGAG CAAAAAATAA ATGTGGGCAT GGAGAATGTT
AAAAGTATTC TGCGCGACCA TTATGTAATC CCTGAAGAAA GCAGTTTAAT TCAATCCAAG
CTGAGGGAAA AAGGACGCTA TAAAATTATT GATAAAGTAT CGGTTGATCT TGACCCGCAG
CGCGATCGCT ACTGGGCCAA TATCAGTAAC AGCAATATAA AAAGGGCTAA TATATCTGAT
GAGCTGGTTA AGAAACATGA AAAAATGTTA TTAGGTGGCA TTTGGGCCAT TATCGACATG
GAATATGACC CCATGATAAG CATTGGCTCA AGCGTTTATC CTTTTGTGGT AAAAGATATT
AACCCTATCC AATTATCTAG CTATGATGCC GGTAAGCTGG CCGCCAAAAG AAAAGAGTTT
AGCAAAGATG AATGGATGAC CCTGCTTTTA AGAAGTGCGG GCTATGAACC GGGCAGTGAA
GGCCTGGATG ACAGGAAGCA GAGCCTTTTG CTGATGAGAT TGATACCACT GGTGGAAGCC
AACTTTAATA TGGTGGAATT GGGACCCCGT TCTTCCGGTA AATCCTATAT CTATAAAGAG
ATAACTCCTT ATGCTCTGCT GATTTCCGGT GGCCAGGGGA CAGTAGCCCA GCTCTTTGTT
AACAACACTA CCGGACGAGT TGGCTCAGTA GGGGAGTGGG ATGCTATCTG TTTTGACGAA
AGCACCGACA AATTATTTAA AGATAGAGAT GCCGTTCCCT TGATGAAAGA TTATATGGAA
TCGGGCTCAT TTTCCCGCGG CGGTAAGACC GGTGAAATTG CTGGCCATGC CTCGGTTATT
TATAATGGCA ATATCAATCA GCCGGTTGAA ACCGTTTTGC AAACTTCCCA TTTGTTTAGC
CCGTTATCGG ATGAGGTTAA TCACGATACT GCGTTTTTGG ACAGGATTAA TCTGTACCTG
CCCGGTTGGG AAATAAGCAA ATTCAGCCCG GATAATTTTA CCCGCCACTA CGGTTTCAGT
ACCGATTTCT TTTCCGAGAT TCTCAAAGCT CAGCGTAAAA CTACCTATTA TGAAGTAATA
GATAAGTATT TTTCCCTGGG ACATCACTTA AAACAGAGAG ATTCCAAGTC AGTTCGTAAA
ACCATTTCCG GTTTTATTAA ACTATTACAT CCTGACGGCA ATTTTACTAA AGAGGATATC
CGGGAATATC TAGTGGTAGC CCTGGAAATG AGAAGACGGG TTAAGGAACA GTTGAAACGC
ATCGGTGGCA TGGAATTCTG GGATACCAAT TTTTCATACA TAGATAAGGA AACTCAGGAA
GAGTTCTTCG TCACTTTGCC TGAGGAACGG GGGAGCGACC TAATTGAAAG AAATCCCTTG
CCCCCGGGAG TTTGCTACAC TGCTACCAGT GACGGGAATA CCAACGCACT GGTTAAAATT
GAAGTGGTGG CTGTGAAAGG CAGTGGCAAG CTAAATATTA CCGGAACCAA CAATAACCAG
GTTAAGGAAA ACATTAAGAA CACCTACAAT TACTTGCGCG CTAACGAAAA GAATATTCTT
ACTGAGCAGC GCTCCTTGAA AGGCTATGAT TTAAATATCC AGATAAGTAA CCTGTTAGGT
GCCTATATCA GCGAGGGGAT TGGCTCGGCG GTATATGTAG CCATTATTTC CTCTATTTAT
AATAAAAACT TGAAAGCTGG ATTAGCAGTC CTGGGTAACC TCTCTATTGG AGGTGCTATT
GAGCAATCCC TACATTTTGC CGACAAGGTT ACCCTCCTGT CAGACAATGG AGCCAAAACG
GTTTTGGTGC CAATTGGCAA TATAAATGAA TTAACCACAT TACCAGCCAG TGTTTTCGAA
AAAGCTGATG TACCTTTTTA CGGGAATAGC CAGATGTTGT TGCAAAAAGC CGTGGAATAG
 
Protein sequence
MIDNLDKKAL EHFRGYVVRK DLAPLIKGGA NVPTFVLEYL LANTCSTEDE QKINVGMENV 
KSILRDHYVI PEESSLIQSK LREKGRYKII DKVSVDLDPQ RDRYWANISN SNIKRANISD
ELVKKHEKML LGGIWAIIDM EYDPMISIGS SVYPFVVKDI NPIQLSSYDA GKLAAKRKEF
SKDEWMTLLL RSAGYEPGSE GLDDRKQSLL LMRLIPLVEA NFNMVELGPR SSGKSYIYKE
ITPYALLISG GQGTVAQLFV NNTTGRVGSV GEWDAICFDE STDKLFKDRD AVPLMKDYME
SGSFSRGGKT GEIAGHASVI YNGNINQPVE TVLQTSHLFS PLSDEVNHDT AFLDRINLYL
PGWEISKFSP DNFTRHYGFS TDFFSEILKA QRKTTYYEVI DKYFSLGHHL KQRDSKSVRK
TISGFIKLLH PDGNFTKEDI REYLVVALEM RRRVKEQLKR IGGMEFWDTN FSYIDKETQE
EFFVTLPEER GSDLIERNPL PPGVCYTATS DGNTNALVKI EVVAVKGSGK LNITGTNNNQ
VKENIKNTYN YLRANEKNIL TEQRSLKGYD LNIQISNLLG AYISEGIGSA VYVAIISSIY
NKNLKAGLAV LGNLSIGGAI EQSLHFADKV TLLSDNGAKT VLVPIGNINE LTTLPASVFE
KADVPFYGNS QMLLQKAVE