| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0979 |
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| Symbol | |
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| ID | 4281750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 1112713 |
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| End bp | 1113645 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638137853 |
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| Product | tRNA isopentenyltransferase |
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| Protein accession | YP_753665 |
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| Protein GI | 114566511 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000897735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAAAC TGGCGGCTAT CGTAGGTCCG ACAGCAGTTG GCAAAACCAA TATATCCCTG
GAAGTAGCCC GGCAAATAAA CGGGGAGATT ATTTCCTGTG ATTCCATGCA GCTTTACCGG
GGCATGAACA TCGGCACCGC CAAGGCCAGT AAGGAAGAGC AAAATATAGT AGCACATCAC
CTTATTGATA TAGCAGATCC CCATGAAAAT TTCACGGTTG CCCGCTATCA ATCCCTGGTA
AAAGACCTTA TCTCCACCAT CAACGCTCGG GGAAAGATTC CCATTCTAGT GGGGGGCACC
GGACTTTACT ACCAGTCAGT GGTTGATGAT TATACTTTTT TTCCTATGGA AGTCCGGCAA
AGCATACGCG ACAAATGGAA CGCTATTATT CAAGAAAAAG GATTGCCTCA TGTCTATCGC
CTATTGGAGC AGATAGACCC TGCTTATGCC CAAATAATCA GCCCCAATGA CCAGAAAAGG
GTGGTACGCG CTTTGGAGGT TTATGAGCTC ACGGGAAAGG CTTTCTCCAC CTTGCAGGAT
AGGGCAGAGA ACACATATTA TTTGGCGGTG GTGGGATTAT ACTTGGAAAG AAGAGAATTA
TATGCCAGAA TTGAAAGACG GGTCGATGAA ATGATAAAGA AGGGGTTGAT TGAGGAGGTT
GCAGCGTTGC GGGAAAAAGG GATAGACCTT TCGTATAACT CTATGCAAGC CCTGGGGTAC
AAACAGGTAT TTTATTTCCT GGAAGGTTTT ATTAATCGGG AAGAGTTGCT AAATGAAATA
AAAAGGGAAA CCCGGCGATA TGCCAAAAGG CAGTTGACCT GGTTCAAAAA AGACCAGCGT
ATAAAGTGGT TTAATGTAGG CGATTTTAGT GATGAGGAGC TTTTGGTTAA AAATATTTGT
ACCTTTATGG AAGGACAATT CGGAATAGTG TAG
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| Protein sequence | MYKLAAIVGP TAVGKTNISL EVARQINGEI ISCDSMQLYR GMNIGTAKAS KEEQNIVAHH
LIDIADPHEN FTVARYQSLV KDLISTINAR GKIPILVGGT GLYYQSVVDD YTFFPMEVRQ
SIRDKWNAII QEKGLPHVYR LLEQIDPAYA QIISPNDQKR VVRALEVYEL TGKAFSTLQD
RAENTYYLAV VGLYLERREL YARIERRVDE MIKKGLIEEV AALREKGIDL SYNSMQALGY
KQVFYFLEGF INREELLNEI KRETRRYAKR QLTWFKKDQR IKWFNVGDFS DEELLVKNIC
TFMEGQFGIV
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