| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0966 |
|---|
| Symbol | |
|---|
| ID | 4282130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 1094211 |
|---|
| End bp | 1095605 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638137840 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_753652 |
|---|
| Protein GI | 114566498 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACC TGCGCCTCAC CCTGGCCGTT ATAGCCGGGA AGATATTAAT CTATATAAGC
CGCCTGCTGG GTCATCAGGG AACTTCTTTA CCCGGCCGGA TAGCCCGTAA GATTTATCCC
CGGATATTGC GAACCCTGTC CACCAACATC CGCCGGGAGA TTGTAGTAAT AACCGGAACC
AATGGTAAGA CTACCACCAG CAACATGCTG GCGGAAATTC TCCAGCAGCA AGGCTACAGC
CTGGTGCATA ACCGACTTGG AGCCAATATG CTTTCTGGAA TTACTACCGC TTTTATTGAA
AAGAGCGATA TTTACGGCAG CAGGAGATTT GATTATGCCT TGCTGGAGAC CGATGAAGCT
ACAGTCCCAT TGCTCTTGCG GGAAACCCGG CCTCGCCTGG TTCTAATCAC CAATTTTTTT
CAGGATCAGT TGGATCGCTA TGGCGAAATG GATCATACCA TAAAATTGAT TCAGGAGGCG
GTAAAGGATC AGGAAATCGA AATGCTGCTC AATGCTGATG ACCCTTTGAC CGCCAACTTC
GAGGCTGAAA CCGGGCTTAA ATGCCGGTAT TATGGCTTTG ATGGCAATTC CTGTGATAGT
AACCGGAGTA TAGATAGTAG GGAAGTAAGA TACTGTGCCT TTTGTGGTCA TCCGCTGGAA
TATGAGAAAT ATCACTATGC TCAACTGGGT CAATATAGCT GTCCTCAATG CCATAGCTGC
AACCCGGAAA GGGATTTTAC CGGACAGGAG CTGGAAATGA GTCCGGATAT TGAATTGAAA
GTGGACGGAA TGGCCCTCAA AAGTCCCTAC CAGGGCTTCC ACAATGCCTA TAACATACTG
GCGGCAGTTT CCCTGGCCCG CTTGTTGGGG GTGGAGGAAG AGAATATTAA GAAGGCTATT
GCCAGTTTCC AACCCCAGGC TGGACGGATG GAGGCTTTCT TCATAAACGG CAAAAGGGTA
GTACTGGCCC TGGTTAAGAA CCCGGCTGCA CTAAACCAGA CCCTGGCCAG CTTGATTTAT
GACCCAAGCC GAAAAAATCT ATTTTTTGCT TTAAACGATA ATGCTGCTGA TGGCCGTGAC
ATCTCTTGGA TTTGGGATGC AGATGTGGAA TTATTGGAGT ACGAGAATGT GATGGTTGAA
CAGATTGTTT GCTCCGGACA GAGAAGCGGC GACATAGCTT TACGCTTCAA ATATGCTGGT
TTCCCTCAGG AAAGGATTAG AATTGAAGCA GAACTGCCGA GGGCCATTGA GCTGGCAGTG
CAGGGCAGCG CGGAGAGCAG TTATATACTC TGCAGCTATA CCGCTCTGTT TGCTTGCCAG
CGCATCCTGA GGGAGATGGA AAAGAGAAGT GGGGCCGGGG AGGAAACGGA AAAGGCTTAC
CAACCCCAAT CATGA
|
|---|
| Protein sequence | MKNLRLTLAV IAGKILIYIS RLLGHQGTSL PGRIARKIYP RILRTLSTNI RREIVVITGT
NGKTTTSNML AEILQQQGYS LVHNRLGANM LSGITTAFIE KSDIYGSRRF DYALLETDEA
TVPLLLRETR PRLVLITNFF QDQLDRYGEM DHTIKLIQEA VKDQEIEMLL NADDPLTANF
EAETGLKCRY YGFDGNSCDS NRSIDSREVR YCAFCGHPLE YEKYHYAQLG QYSCPQCHSC
NPERDFTGQE LEMSPDIELK VDGMALKSPY QGFHNAYNIL AAVSLARLLG VEEENIKKAI
ASFQPQAGRM EAFFINGKRV VLALVKNPAA LNQTLASLIY DPSRKNLFFA LNDNAADGRD
ISWIWDADVE LLEYENVMVE QIVCSGQRSG DIALRFKYAG FPQERIRIEA ELPRAIELAV
QGSAESSYIL CSYTALFACQ RILREMEKRS GAGEETEKAY QPQS
|
|---|
| |