Gene Swol_0962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0962 
SymbolileS 
ID4282126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1088450 
End bp1091233 
Gene Length2784 bp 
Protein Length927 aa 
Translation table11 
GC content50% 
IMG OID638137836 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_753648 
Protein GI114566494 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0001965 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAG GAAAGTATGA CGGAACCTTG AATCTTCCCC AAACCGGTTT TCCCATGAGG 
GCCAACCTGC CCCAGAGGGA GCCGGAGATA TTGAAGTTCT GGGATGAAAT TGACATATAC
CGGCGCATAC AGGAGAAAAA CGCTGGCCGA CCCCAGTTTA TTCTGCATGA CGGACCGCCG
TATGCTAATG GGAACATTCA CCTGGGACAT ACCCTTAATA AAGTTTTGAA AGATATTATT
GTTAAATACC GCTCCATGAG CGGTTACGAC TCTCCCTATA TCCCGGGCTG GGATACGCAT
GGCCTGCCTA TCGAGCAGCA GGCCATAAAG AATCTGGGTA TTGACCGGCA TAAGACGGAT
GTGGTAGAGT TCCGCGAACA CTGCCGCGAC TATGCCCTTA AATATGTGGA AATACAGAAA
GAACAATTTA AACGACTGGG GGTGCGCGGA GACTGGGAAG ATCCCTACCT CACCCTGAGT
CCAGGTTTTG AGTCTATACA AATCAAAGTA TTTGGAGAAA TGGCTAAAAA AGGTTTCATT
TACAAAGGTT TAAAGCCGGT ATACTGGTGC GGGGACTGTG AAACGGCCCT GGCCGAGGCG
GAAGTGGAAT ACAATGAAAA GGTCTCCCCT TCCATTTATG TCAAGTTCCC GGTAAAGGAT
GGAAAGGGGG TTTTACCTGA AGATGCCTTT GTTATCATCT GGACCACCAC CCCCTGGACC
CTGCCGGCCA ACACCGGAAT TTGCCTGCAT CCGGGCTTTG ATTATGTTTT GCTGGAAGTA
AAAGGAGAAA AATACCTCCT GGCTCAAGGA TTGCTGGAAG CAGTAGCCGG AGAGCTGGGC
TGGGATAATT ATCAGATTCT GGACAAATAT AAAGGGGAAG AGCTGGAACG GGTGATTTGC
CACCATCCTT TCTTTGCCCG CGATTCCCTA TTGGTATTAG GTGAACATGT CACCCTTGAA
GCTGGTACCG GCTGCGTACA TACCGCTCCC GGACATGGTG AAGACGACTT TCATGTAGGC
CAGGAATACG GATTGGAAGT GATTTCTCCG GTGGACGACC GGGGTCGATT CACCGCAGAA
GCCGAAAAGT TCCAGGGGCT CTATGTTCAT GATGCCAATA AAGCGGTTAT AGAAGAGCTG
GAAAAACGGA ATATGCTGCT GAAGGCGGCA AGTATTGAAC ACCAGTATCC CTATTGCTGG
CGCTGTAAGC AGCCTATAAT CTACCGGGCT ACGGAACAAT GGTTTGCGTC CATTGATGGT
TTTCGCCAGG ATGCCCTTAA TGCTATTGAT ACGGTTAAGT GGATTCCATC CTGGGGCCGT
GACCGGATTT TCAATATGAT TAGAGACCGG GGGGATTGGT GTATCTCCCG GCAGCGTACC
TGGGGAGTAC CTATTCCCAT ATTTTACTGT GAATCCTGCG GGGAAGCCCT GATAAACGAT
GAAACCATCC AACGGGTGAG CGAGCTCTTT GCTGCGAATG GTTCTGATAT CTGGTTTGCG
AAAACGGCGG CAGAACTTAT GCCGCCAGGC TGCAGCTGTG AACACTGCGG CGGAAGTACT
TTCCGCAAAG AGAGCGATAT TATGGATGTG TGGTTTGATT CCGGTTCCAG CCACATGGCT
GTTTTAGAAC CGCGCCAAGA ACTGCGCTGG CCGTCTGATA TGTATCTGGA AGGCAGCGAC
CAGCACCGTG GCTGGTTTAA TTCTTCCCTT TCGACAGCGG TGGCAATCAG GGGTGCTGCC
CCCTATAGAG AGGTTTTGAC TCATGGATTT GTGGTAGATG AGCAGGGCCG CAAGATGTCC
AAGTCCCTGG GTAATGTGGT GGACCCACTG CGGATGACCC GGGAAATGGG AGCAGATATA
CTGCGCCTGT GGGTATCATC CGCCGATTAC CGCAATGATG TTTCGGTTTC GCCCAATATA
ATAAAGCAGA GTGCGGAGGC TTATCGCAAG ATTCGCAATA CCTGCCGCTT TATCCTGGGT
AATCTTTTTG ATTTTGACCC CGGGAAAGAG CGGGTAAGCT ATGATAAGCT GAGTGAACTC
GATCAATGGG CCTTGCTCAA GCTGGACAAA TTAATCCGCC GGGTCACCAA AGCTTATGAG
GATTATGAAT TCCATGTGGT ATTTCATTCC ATGCACAATT TTTGCACGGT TGACCTGAGC
AATATCTACT TTGACATTTT GAAGGATAAA CTATATTGCT CACACCCGCA GGATGCGGAA
AGGAAAGCAG CCCAGACCGT ACTCTATGAT ATAATTAACG CCCTGGTGGT AATGCTTACT
CCCATACTGG CCTTCAGCAG TGAGGAAATC TGGAGCTATC TCAAGAAGGA AGGGCAGGCG
GAAAGTGTCC AATTGTTGGA ATGGCCGCAA GCTAATGATG AGTATCTCAA CCAGGCTATC
GAAAACCGTA TGTCAAGGGT TCTGGAATTG CGGGAAGTGG TTACCAAAGC CCTGGAAGAA
GCCCGGAGCA AGAAGGTAAT AGGTCACTCC CTGGGAGCAT GGATTACCAT CTATGCCAGC
CCCGAATGGA CGGAACTTTT GAAAGCTACC GCCGGCCTGG AAAAAATATT CATTGTTTCC
CGGGCGGAAC TGAAGCCGGA AACGGAAGCG CCGGCAGAAG CCCTGGCCCT GGAGGGGGTT
GAGGGAATCC GTGTTATGGT TCAAGCCGCC GAGGGCAGCA AGTGTGAACG CTGCTGGATA
ATTGAGAATT CAGTAGGCGA AGATTTAAAA CATCCCACAT TATGCCAACG CTGTGCAGAG
GTTGTGGCCC AACTGCAAGG ATAG
 
Protein sequence
MAKGKYDGTL NLPQTGFPMR ANLPQREPEI LKFWDEIDIY RRIQEKNAGR PQFILHDGPP 
YANGNIHLGH TLNKVLKDII VKYRSMSGYD SPYIPGWDTH GLPIEQQAIK NLGIDRHKTD
VVEFREHCRD YALKYVEIQK EQFKRLGVRG DWEDPYLTLS PGFESIQIKV FGEMAKKGFI
YKGLKPVYWC GDCETALAEA EVEYNEKVSP SIYVKFPVKD GKGVLPEDAF VIIWTTTPWT
LPANTGICLH PGFDYVLLEV KGEKYLLAQG LLEAVAGELG WDNYQILDKY KGEELERVIC
HHPFFARDSL LVLGEHVTLE AGTGCVHTAP GHGEDDFHVG QEYGLEVISP VDDRGRFTAE
AEKFQGLYVH DANKAVIEEL EKRNMLLKAA SIEHQYPYCW RCKQPIIYRA TEQWFASIDG
FRQDALNAID TVKWIPSWGR DRIFNMIRDR GDWCISRQRT WGVPIPIFYC ESCGEALIND
ETIQRVSELF AANGSDIWFA KTAAELMPPG CSCEHCGGST FRKESDIMDV WFDSGSSHMA
VLEPRQELRW PSDMYLEGSD QHRGWFNSSL STAVAIRGAA PYREVLTHGF VVDEQGRKMS
KSLGNVVDPL RMTREMGADI LRLWVSSADY RNDVSVSPNI IKQSAEAYRK IRNTCRFILG
NLFDFDPGKE RVSYDKLSEL DQWALLKLDK LIRRVTKAYE DYEFHVVFHS MHNFCTVDLS
NIYFDILKDK LYCSHPQDAE RKAAQTVLYD IINALVVMLT PILAFSSEEI WSYLKKEGQA
ESVQLLEWPQ ANDEYLNQAI ENRMSRVLEL REVVTKALEE ARSKKVIGHS LGAWITIYAS
PEWTELLKAT AGLEKIFIVS RAELKPETEA PAEALALEGV EGIRVMVQAA EGSKCERCWI
IENSVGEDLK HPTLCQRCAE VVAQLQG