Gene Swol_0925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0925 
Symbol 
ID4282867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1044676 
End bp1047036 
Gene Length2361 bp 
Protein Length786 aa 
Translation table11 
GC content43% 
IMG OID638137791 
ProductATP-dependent protease 
Protein accessionYP_753612 
Protein GI114566458 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1067] Predicted ATP-dependent protease 
TIGRFAM ID[TIGR00764] lon-related putative ATP-dependent protease 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.819231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTTGGAA TCATCGGGCA GGAACGGGCT TATCGTTCCC TGTCGATGGG GGTAGATATT 
GAAAAGCAGG GTTATAATGT ATACCTGGCT GGAGCCATGG GGACGGGCAA AACCACCCTG
GCCTGGGAGA TATTGGAGAG AAAAGCTAAA AATGAACCTC CTCCCCCTGA CTGCTGCTAT
GTGCATAATT TTAAAAATCC GGATTGTCCA CAGGTTTTAC TCTTGCCTGC AGGCATGGGG
AGCAGTTTTA AAAAAGACCT GGAAGCTGGA ATAGACCGGG CCATAAAAAC CTTGCTCAAG
GCTTTTGAAA GTGAAGAATA CGAGTATGAA AAAAACGCTA TATTGGGTGT TTTTGTTGAC
GAAACCAATC GAATGTATAT GCAGTTGGAT GAAGAAGCAC ACAGCTATGG TTTTACCATA
AGCCGTAACC AAAACAGCAT CAACAGCGTT CCTCTGAAAA ACGGGGAGCC CCTCAGCCAG
GAAGAATTCA TCTCTCTACC GGAAGAAGAG CGGGCCGAGA TAATGAAGAA AAGTGCCATC
ATTCAGGAAA AACTTAACCA GGCTTTTCGT CAATTTAAGG AGTTGGAGAA AAACATTAAA
GTAAAGGTCA AAGAGCTGGA AAATGAAACT GCCAGGTCGG CACTGGCACC ATTTTTCGCT
GAATTGTTTG AAAAGTATCG TTTATGCAAA GAGCTGGTGG AACATATCGA AGCCATACAA
GAGGATCTCC TGGCCAATTA TGAAGTTTTT GTTCAGCCGG AAGAAAAATC CCCTCTAAGC
CTGTTCCGGC TAATTGACCG CAGGACTTCG TTGCGCCGCT ACCAGGTAAA TTTAATAATT
GATAATTCGG AATTGAAATA CGCTCCCGTA ATCTTTGAAA GCAATCCTAC TTATGCCAAT
CTCTTCGGAC AGATAGAATA CGAAGGAGAA TTCGGTATTC TAGCTACGGA TTTTTCCAAG
ATTAAGGCCG GAGCCATACA CCGGGCCAAT GGTGGCTATC TGATTCTACG GGTTTATGAT
GTAATTAAAA ACTACTATGT ATGGGATGCT CTCAAGCGCT GTCTTATAAA CCAGCAAATT
GTGGTGGAAA ACCTGAGCCG AACGTTGGGT TTAAGTAATA CAGAGACTCT GCAACCGCAA
CCCATTCCCG CCAAACTTAA AGTGGTATTG ATTGGGGAGC CACTGTATTA TTATCTCCTT
TATAACTGGG ATGAAGAATT CAGGCGACTT TTTAGGATCA GGGCAGATTT TGATATTGAA
GTGAAAAAAA ACCGCAAGCG GATTAAAGAA TACGCCAGCT TTATCAGTTC CGTATGTCAA
AAGGAAGGTC TGAAACATTT TACCCCGCAA GCAGTTGCTG CTGTGGTTGA TTATGCTACC
CGCCTGGCGG AAGATAAGAA TAAAATATCT ACCATGCTGA ATAAAGTGGT GGAAATAGTG
ATTGAGGCTG ACTGCTGGGC CAATTATGAG AGAGCGGAAT TGGTTGGCCT GGAACATGTA
AAAAAAGCCA TAGTGGAAAA AAAATATCGA TCTTCCCTGT TGGAAAATAA AATTCAAGAT
ATGATGCTTG AAGAAAGCCT GATAATTAAT GTGAATGGTA AAAAGGTGGG AGAACTTAAC
GGCCTGGCAG TATATGAAAT AGGGGACTAT GCTTTCGGTA AGCCGGTGCG CATCACCGCC
AAAACCTTTA TGGGAGAAAA GGGATTGGTA AATATTGAAC GAGAAATCCG TATGAGTGGG
AATATTCATA GCAAAGGAGT TCTTACCTTA AGCGGCTATC TGGGAGCTAA GTATGCCCGG
GAAAAACCTC TAACCCTATC GGCCAGTTTA ACTTTTGAAC AGAGTTATCA GGGAATAGAA
GGAGATAGTG CCTCCAGTGC CGAATTATTT GCATTATTAT CCAGCCTGGC GGATCTTCCT
ATTAAACAGG GAATTGCAGT AACTGGTTCC GTCAATCAAA ATGGTGAAAT TCAACCAGTA
GGAGGCATTA ACCAAAAAAT CGAAGGATTT TTTAGACTTT GCCAAATGAA AGGTTTGAAT
GGAGAACAGG GAGTTATTAT ACCCAGGAAA AATTTATCCC AGCTAATGTT GGAGGAAGAG
CTGGTTGAAG CCGTAAAAAA ACGACAATTT ACCATATGGG CTATTGAAGA TATTGATGAA
GGTCTGGAGA TACTTATGGG CAGGACAGCC GGAAAAAGGG AAGAGAACGG AAGATTTTCG
CCGGACAGTG TTCATGCTCT GGTAGACCAA AGATTAAAGG AATGGAACAG CAAAAAAAGA
CAAGGAATGA TGTACTCGGA TAGGGCTATT AGTGAGGGTC GCCGCACTCA AAAGAGTAGA
AGGAGGAAAG GCCATGAGTA A
 
Protein sequence
MLGIIGQERA YRSLSMGVDI EKQGYNVYLA GAMGTGKTTL AWEILERKAK NEPPPPDCCY 
VHNFKNPDCP QVLLLPAGMG SSFKKDLEAG IDRAIKTLLK AFESEEYEYE KNAILGVFVD
ETNRMYMQLD EEAHSYGFTI SRNQNSINSV PLKNGEPLSQ EEFISLPEEE RAEIMKKSAI
IQEKLNQAFR QFKELEKNIK VKVKELENET ARSALAPFFA ELFEKYRLCK ELVEHIEAIQ
EDLLANYEVF VQPEEKSPLS LFRLIDRRTS LRRYQVNLII DNSELKYAPV IFESNPTYAN
LFGQIEYEGE FGILATDFSK IKAGAIHRAN GGYLILRVYD VIKNYYVWDA LKRCLINQQI
VVENLSRTLG LSNTETLQPQ PIPAKLKVVL IGEPLYYYLL YNWDEEFRRL FRIRADFDIE
VKKNRKRIKE YASFISSVCQ KEGLKHFTPQ AVAAVVDYAT RLAEDKNKIS TMLNKVVEIV
IEADCWANYE RAELVGLEHV KKAIVEKKYR SSLLENKIQD MMLEESLIIN VNGKKVGELN
GLAVYEIGDY AFGKPVRITA KTFMGEKGLV NIEREIRMSG NIHSKGVLTL SGYLGAKYAR
EKPLTLSASL TFEQSYQGIE GDSASSAELF ALLSSLADLP IKQGIAVTGS VNQNGEIQPV
GGINQKIEGF FRLCQMKGLN GEQGVIIPRK NLSQLMLEEE LVEAVKKRQF TIWAIEDIDE
GLEILMGRTA GKREENGRFS PDSVHALVDQ RLKEWNSKKR QGMMYSDRAI SEGRRTQKSR
RRKGHE