Gene Swol_0907 details

Gene Information

• Locus tag: Swol_0907
• ID: 4281130
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Syntrophomonas wolfei subsp. wolfei str. Goettingen
• Kingdom: Bacteria
• Replicon accession: NC_008346
• Strand: +
• Start bp: 1027886
• End bp: 1028545
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 638137773
• Product: hypothetical protein
• Protein accession: YP_753594
• Protein GI: 114566440
• COG category: [V] Defense mechanisms
• COG ID: [COG2720] Uncharacterized vancomycin resistance protein

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGAGAATA TGGCTCTTAA GGAGCAGAAA CTACCTTTGG AACCGGCTTT AGACAAAGAA 
ACAGGAGAAG TAATTCCCGA GCAGGAAGGC TGCATAGTTG ATATTGAAGG CAGTGTGAGT 
AAAGCTTTGC AAGCAGAAGA AGGCGACAAG CTGGAATTGC TGATGCGGGC AATTCCTTCC 
CGTTATTCCA GCCGGGACCT GCAAAAAATA ACCTTGAGCC GGGGCTACTA CGAAACCTGG 
TTTACCGGGA CTTACCAGCG TTATACCAAC GTTTCCCTGG CCTGCAGCAG TGTTAACAAT 
AGCCTGCTAT GGCCCGGGCA GGAATTTTCT TTTAATGAAA CAGTAGGTCC CAGAACTCCG 
GAGAGAGGTT ATATGCCGGC ACCGGTGTTT TTAATGGGGG CCAGCGAACT GGACTATGGA 
GGGGGGGTTT GCCAGGTAGC AACAACGGTT TTTAATGCGG CTGGAAAGGC CGGCCTGAAA 
ATAATTGAGC GTCATCTGCA CAGCCGGAGG GTTCATTATG TAGCTGAGGG TAAAGACGCT 
ACGGTAAGCT ATGGAGATCT GGATCTCAAA TTTTCCAATA ATACAGGTAG TCCATTGATC 
ATCAAGGCCG GAATCAACCG GGGTAAGGTA TGGGTAAATA TTTTGGGGGA GGAAGATTAA 

 

Protein sequence

MENMALKEQK LPLEPALDKE TGEVIPEQEG CIVDIEGSVS KALQAEEGDK LELLMRAIPS 
RYSSRDLQKI TLSRGYYETW FTGTYQRYTN VSLACSSVNN SLLWPGQEFS FNETVGPRTP 
ERGYMPAPVF LMGASELDYG GGVCQVATTV FNAAGKAGLK IIERHLHSRR VHYVAEGKDA 
TVSYGDLDLK FSNNTGSPLI IKAGINRGKV WVNILGEED