Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0877 |
Symbol | |
ID | 4282008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 996088 |
End bp | 996573 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638137745 |
Product | CheD, stimulates methylation of MCP proteins |
Protein accession | YP_753566 |
Protein GI | 114566412 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.312761 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAAA TCATACAAGT CGGCATGGCT GACTTTAAGA TGGCTACAGC ACCAGATAAA TTGATAACCG CTGGATTGGG TTCCTGTATC GGTATATGTC TTTATGATAA AGTTATTAAA CTAGGAAGCC TGACCCATAT AATGCTACCC TCCAGCAGCC AGGCCAAAAA TGCCAGCAAT GAAGCCAAGT TTGCCGATAC CGGTTTAAAA CTGGCCATCA GAGAAATGGA GAAAAACGGT GCCCAGGCCT CGCGTCTCCT GGCTAAAATA GCCGGAGGTG CGCAGATGTT CAAGTTTTCC GGGGAGAGCG ACATCATGAA AATCGGAGAG CGTAATAGCG TAGCGGTAAA GGAAAACCTG CAACTCCATA GAATTAAGTT GCTTTCCAGT GATACGGGTG GAAATTATGG CCGCACTATT ATTTTCGATC CCGAAACCGG AGATCTGCTG GTTAAGACCA TTGGACATGG GGAGAGAATT ATTTAG
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Protein sequence | MSKIIQVGMA DFKMATAPDK LITAGLGSCI GICLYDKVIK LGSLTHIMLP SSSQAKNASN EAKFADTGLK LAIREMEKNG AQASRLLAKI AGGAQMFKFS GESDIMKIGE RNSVAVKENL QLHRIKLLSS DTGGNYGRTI IFDPETGDLL VKTIGHGERI I
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