Gene Swol_0874 details

Gene Information

• Locus tag: Swol_0874
• ID: 4282005
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Syntrophomonas wolfei subsp. wolfei str. Goettingen
• Kingdom: Bacteria
• Replicon accession: NC_008346
• Strand: +
• Start bp: 992792
• End bp: 994825
• Gene Length: 2034 bp
• Protein Length: 677 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 638137742
• Product: putative CheA signal transduction histidine kinases
• Protein accession: YP_753563
• Protein GI: 114566409
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0643] Chemotaxis protein histidine kinase and related kinases

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGATGG ATATGTCCCA GTATCTAGAT GTTTTTTTGG AGGAGAGCAA AGAGCATTTG 
GAGAGCCTGA ACCAAAAACT ACTGGACTGG GAGAAAAACT CCGGCGATAT TGCGGCCTTG 
AACGAAATAT TTCGAGCCGC CCATACCCTT AAAGGTATGT CTTCAACTAT GGGCTTTGAA 
GACCTGGCTG ACCTGACCCA CCACATGGAA AATATTTTAT CTGATTTGAA AGAAGGTCTT 
TTGGAGGTAA CTCCCCAGGT GGTGGATATT CTCTTCCAAT GTTTCGACCG GCTCCAGCTA 
ATTATTGAGC GGATTGAATC CAATGGCTCT GGAGAAATGG ATAACAGTGA GTTGATAATG 
ATTCTGGAGA GTATTAAGGG CGGCGGTTTT CAAACGACAG CTCCTGCGGC TGATAACGGG 
CAGGACTTGA AACCGGAGGA AATCCTTACT ACACAGCATT CTAATACTAC ATCATTTGAT 
TTTAACCAGT ATGATATGAC GGTTATGCGT GAGGCCGCCA GCAGGAATTT TGCCAGTATC 
TATATTAGAC TTTTTGTGGA TCCTGGATGT TTAATGAAAT CGGTTCGTGC CTTTATGGTT 
TTTAAGGTTT TGGAAGAAGA TAGCGAAATT ATAAAATCCT TTCCTCCAGC TTCGGATATT 
GAAGAAGGAA AATTTAGTGA GGAAATCGAA CTGCTGGTAA TCACTGCTTC ATCCATCAAG 
GAATTGGAAG GACGTTTGAA TGCTATTTCT GAAATTAAGG TAAGGGAAAT TAAAGAAATT 
AACTTTGCTT CGCTGGCTTC AGGTAGCCAG CAAGAAACAA ACGGTGATCA GATAAGCAGT 
AGCCAGGATG TGCTTAAGGA GAGTAAAGAA CAAAAAGGGC ACAAAGTCAA ACAGACCGTC 
CGGGTTGATA TAGAACGATT GGACATATTG ATGAATTTGG TGGGCGAACT GGTCATGCAC 
AAGGGACGCT TGGAACAAAT CGGAGCGAGT AGTAAAATCG ATGAGCTAAA TGAGACCATT 
GAACAGATTG ATCGGATTAG CGGTGATCTC CAGTCAGTGG TCATGAAAGT ACGTATGGTT 
CCGGTTGAAC AGGTATTTAA CCGTTTTCCC CGGATGGTAA GAGATCTGGC CAAGGAGTTG 
AATAAAGAAG TCGATTTTCT TATCGAGGGC AAAGAAACGG AACTGGATCG TACCGTTATT 
GATGAAATCG GGGATCCTCT GGTGCATCTG TTGAGAAATG CCGTTGACCA TGGTGTTGAG 
TCACCTCAAG AACGCTTGAA AAGAGGAAAG CCGCAGAAAG CCACCGTAAT TCTGCGCGCC 
CGGCATGAAG GAAACAATGT TTATATTGAG GTCGAAGATG ACGGGGCGGG AATTAATATC 
AAAAGAACAC TGGAAAAAGC GGTGGAAAAA GGAATTATAA GCGCAAAAGA AGCGGAAGTA 
ATAAGCCCCG AGGAGGCTAG TCAAATCCTC TTTAGTCCGG GCTTTAGCAC CACCGAGAAT 
ATAACCGATG TCTCCGGGCG AGGAGTGGGG CTCGATGTAG TAAAAACCAA GATAGAATCT 
CTCTCCGGGG AGATATTTGT TGATTCCCGA CCGGGTCAGG GAACCCGGTT CAGGATTAAA 
TTGCCCCTAA CCCTGGCCAT TATTCAAGCC CTGATGATTT CCGTACATGA TGAAATCTAT 
GCCATACCCC TGGGTTCAGT GGATGAAACC ACTATGATTA AAAATGAAGA TATTAAAATG 
GTACAAAACC AGGAAGTCAT CGTACTCAGG GGAAATGTAT TGCCGCTATT CCGGCTGGCC 
AGCCTTTTGG AAATACCAGG TGAAGCAGCT GCCAACGAAG AAGAAATGTA TGTGGTGATA 
GTACGTAAAG GAGAACGACA AATCGGCCTG GTAGTTGATA CCCTGATAGG ACAGCAGGAA 
ATAGTAATCA AATCCCTGGG TAAAATACTG GCTGGTATTC CAGGCATAGC AGGAGCAATT 
GTTGCAGGTG ACGGCTTCGT AAGACTTATC ATTGACATAG CTACCCTTTT TTAA 

 

Protein sequence

MKMDMSQYLD VFLEESKEHL ESLNQKLLDW EKNSGDIAAL NEIFRAAHTL KGMSSTMGFE 
DLADLTHHME NILSDLKEGL LEVTPQVVDI LFQCFDRLQL IIERIESNGS GEMDNSELIM 
ILESIKGGGF QTTAPAADNG QDLKPEEILT TQHSNTTSFD FNQYDMTVMR EAASRNFASI 
YIRLFVDPGC LMKSVRAFMV FKVLEEDSEI IKSFPPASDI EEGKFSEEIE LLVITASSIK 
ELEGRLNAIS EIKVREIKEI NFASLASGSQ QETNGDQISS SQDVLKESKE QKGHKVKQTV 
RVDIERLDIL MNLVGELVMH KGRLEQIGAS SKIDELNETI EQIDRISGDL QSVVMKVRMV 
PVEQVFNRFP RMVRDLAKEL NKEVDFLIEG KETELDRTVI DEIGDPLVHL LRNAVDHGVE 
SPQERLKRGK PQKATVILRA RHEGNNVYIE VEDDGAGINI KRTLEKAVEK GIISAKEAEV 
ISPEEASQIL FSPGFSTTEN ITDVSGRGVG LDVVKTKIES LSGEIFVDSR PGQGTRFRIK 
LPLTLAIIQA LMISVHDEIY AIPLGSVDET TMIKNEDIKM VQNQEVIVLR GNVLPLFRLA 
SLLEIPGEAA ANEEEMYVVI VRKGERQIGL VVDTLIGQQE IVIKSLGKIL AGIPGIAGAI 
VAGDGFVRLI IDIATLF