Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0867 |
Symbol | |
ID | 4281980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 984925 |
End bp | 985686 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638137735 |
Product | flagellar biosynthetic protein FliR |
Protein accession | YP_753556 |
Protein GI | 114566402 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCTATG CTTTGGAAAG CTTTTTCTTT TTGCTGGCCC GCCTGTCCGG ACTTTTTATC ACTGCTCCCA TATTCAGCAG CAGGATGATG CCGGGGCGGG TTAGAGCTTT AATTGTTATA ATGTTGGCGG CTACCCTGGC CTATTTTGTA CCGGTGGAAT ATAGCCGGAA TATCAATACG CCCGGTTTGT TCATAGCGGC TCTGGCGGTG GAGATCTTTA TCGGTTATAC CATTGGCTTT GTTATTTATG CGGTTTTAGC CACCATACAA CTGTCCGGGC AGCTAATGGA TATGCTGATG GGGTTTTCCA TTGTAAATGT GGTTGACCCG CAGTCAGGGA CCCAAATCCC CTTAATGGGC AACTTTACCC AAGCCCTGGC TTTATTGACT TACCTGGCTA TTGATGGTCA TCATTATCTT CTGCAGGCAT TAGCCCAGAG CTATGCCATA GTTCCGGTTA TGAGTGCCCA TTTGCCGGGC GGTTTTTTGG AACTGCTGGT GGAAGTAGGG ACTTATATCT TTGTGGTTGC GGTAAAGATT GCGGCGCCCA TGCTGGTCGC CATTTTGACC AGTGATGTGG CTATGGGTTT TATAGCCAGA ACCGTACCGC AGATGAATGT ATTTCTGGTG GGGCTGCCCC TAAAAATATT TTTGGGCTTG ATCACCCTGC TTCTTCTTTT ACCCATTTAT CTCTGGGTAT ACAATGTTCT TTTTGCCGAG TTTTTCGGCT ATCTGGATCG AATTATTCTT TTTATGGGGT AA
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Protein sequence | MPYALESFFF LLARLSGLFI TAPIFSSRMM PGRVRALIVI MLAATLAYFV PVEYSRNINT PGLFIAALAV EIFIGYTIGF VIYAVLATIQ LSGQLMDMLM GFSIVNVVDP QSGTQIPLMG NFTQALALLT YLAIDGHHYL LQALAQSYAI VPVMSAHLPG GFLELLVEVG TYIFVVAVKI AAPMLVAILT SDVAMGFIAR TVPQMNVFLV GLPLKIFLGL ITLLLLLPIY LWVYNVLFAE FFGYLDRIIL FMG
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