Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0836 |
Symbol | |
ID | 4281931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 954963 |
End bp | 955667 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638137706 |
Product | sporulation sigma factor SigG |
Protein accession | YP_753527 |
Protein GI | 114566373 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02850] RNA polymerase sigma-G factor [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.904059 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATAC TCTTTACAGA AATGCATCAG GGCAAGACCC AGGCCAGAGA AAAATTAATT CAGGGTAACA TTAGATTGGT TTTAAGTGTT ATTCAAAGGT TCACTAATAG AGGCGAGTAT GTTGATGATC TTTTTCAAGT GGGCTGCATA GGTTTAATTA AATCAATAGA TAATTTCGAC TTAAGCCAGA ATGTACGCTT CTCTACCTAC GCGGTACCGA TGATTATCGG AGAAATAAGA CGCTATCTGC GGGACAATAA CGCCGTTAGG GTATCAAGAT CATTGCGCGA TATTGCCTAC AAGGCTTTAC AGGTAAGAGA AAAACTCATC AATGATAACT CGGCTGAGCC TACGGTAAGC CAAATAGCGC AACACCTTGA TGTCAGCCGG GAAGAAGTGG TTTTTGCTTT GGATGCAATC CAGGAACCGG TATCCCTATT TGAACCAATA TATAATGACG GGGGCGATCC CATTTTGGTA ATGGATCAGC TCAGTGATGA ACGGAGTGGG GATGAGCAAT GGTTGGAAGA AATATCGATA AAAGAAGCCA TGAAGAAGTT GAATGATAGG GAAAAACATA TAGTGTCATT GCGATTTTTT GCTGGTAAAA CCCAGATGGA GGTGGCGGAA GAAATCGGTA TCTCACAGGC TCAGGTTTCC CGCCTGGAAA AAGCAGCACT AAAACAATTG CGGAAATATG TTTAA
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Protein sequence | MKILFTEMHQ GKTQAREKLI QGNIRLVLSV IQRFTNRGEY VDDLFQVGCI GLIKSIDNFD LSQNVRFSTY AVPMIIGEIR RYLRDNNAVR VSRSLRDIAY KALQVREKLI NDNSAEPTVS QIAQHLDVSR EEVVFALDAI QEPVSLFEPI YNDGGDPILV MDQLSDERSG DEQWLEEISI KEAMKKLNDR EKHIVSLRFF AGKTQMEVAE EIGISQAQVS RLEKAALKQL RKYV
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