Gene Swol_0836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0836 
Symbol 
ID4281931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp954963 
End bp955667 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content42% 
IMG OID638137706 
Productsporulation sigma factor SigG 
Protein accessionYP_753527 
Protein GI114566373 
COG category[K] Transcription 
COG ID[COG1191] DNA-directed RNA polymerase specialized sigma subunit 
TIGRFAM ID[TIGR02850] RNA polymerase sigma-G factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.904059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAC TCTTTACAGA AATGCATCAG GGCAAGACCC AGGCCAGAGA AAAATTAATT 
CAGGGTAACA TTAGATTGGT TTTAAGTGTT ATTCAAAGGT TCACTAATAG AGGCGAGTAT
GTTGATGATC TTTTTCAAGT GGGCTGCATA GGTTTAATTA AATCAATAGA TAATTTCGAC
TTAAGCCAGA ATGTACGCTT CTCTACCTAC GCGGTACCGA TGATTATCGG AGAAATAAGA
CGCTATCTGC GGGACAATAA CGCCGTTAGG GTATCAAGAT CATTGCGCGA TATTGCCTAC
AAGGCTTTAC AGGTAAGAGA AAAACTCATC AATGATAACT CGGCTGAGCC TACGGTAAGC
CAAATAGCGC AACACCTTGA TGTCAGCCGG GAAGAAGTGG TTTTTGCTTT GGATGCAATC
CAGGAACCGG TATCCCTATT TGAACCAATA TATAATGACG GGGGCGATCC CATTTTGGTA
ATGGATCAGC TCAGTGATGA ACGGAGTGGG GATGAGCAAT GGTTGGAAGA AATATCGATA
AAAGAAGCCA TGAAGAAGTT GAATGATAGG GAAAAACATA TAGTGTCATT GCGATTTTTT
GCTGGTAAAA CCCAGATGGA GGTGGCGGAA GAAATCGGTA TCTCACAGGC TCAGGTTTCC
CGCCTGGAAA AAGCAGCACT AAAACAATTG CGGAAATATG TTTAA
 
Protein sequence
MKILFTEMHQ GKTQAREKLI QGNIRLVLSV IQRFTNRGEY VDDLFQVGCI GLIKSIDNFD 
LSQNVRFSTY AVPMIIGEIR RYLRDNNAVR VSRSLRDIAY KALQVREKLI NDNSAEPTVS
QIAQHLDVSR EEVVFALDAI QEPVSLFEPI YNDGGDPILV MDQLSDERSG DEQWLEEISI
KEAMKKLNDR EKHIVSLRFF AGKTQMEVAE EIGISQAQVS RLEKAALKQL RKYV