Gene Swol_0781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0781 
Symbol 
ID4282828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp888487 
End bp889782 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content50% 
IMG OID638137652 
Productamidohydrolase family protein 
Protein accessionYP_753473 
Protein GI114566319 
COG category[F] Nucleotide transport and metabolism
[R] General function prediction only 
COG ID[COG0402] Cytosine deaminase and related metal-dependent hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGATTC TTTTAGACAA TATCAGCATT ATCCCTGTAA GCGGAAGTAA TTCTTTCATA 
GAGAAAGGCT ATCTTTTGAT TGAAGATGTT TTTATTAAAG AGCTGGGGAC GGGGAAAGCT
CCGGAAGGGG AATTTGACCA TATAATCGAT GGTGAAAACC AGGTGCTGCT CCCCGGTTTT
ATCAATGCCC ATACCCATGC AGCCATGACC CTTTTGCGGG GTTATGCGGA TGACCTGCCT
CTGATGGAAT GGTTGGAAAA CAAAATCTGG CCCCTGGAGG CGAAACTGAC CCCGGAAGAT
ATCTATTGGG GTACCATGCT GGCTATTGTG GAGATGATTA AGTCGGGTAC TACCACTTTT
AATGATATGT ATTTCTGTAT GGATGAGGTG GCCCGGGCGG TTGAATTGAG CGGAATGAGG
GCAGTCTTAG CACGGGGAAT GGTAGGAGTG GGACCGGAAA GCGAGCAGGC CATTGAGGAC
AGCCGCGAGC TCATTGGGAA ATGGCAGGGC CAGGCCGGTG GCAGGATTTC TTTCCGGCTG
GGGCCTCATG CTCCCTATAC CTGCCCTCCG GCTTACCTGG AAAGGGTTAT GCAACTCTCC
GATGAACTGC AAGCAGGTAT ACATATTCAT GTAGCGGAGA CCCGGGTGGA ATATGAGGAT
ATACTGAAGC AATATGGAAA AACGCCGGTT TCTCATTTGG AATCCCTGGG GCTTTTTCAA
GGACGTCAGG TCTTGGCGGC TCATTGTGTT CACCTCAACG AGGAGGAAAT CGGGATATTG
CATCAGTACC AGGTGGGTGT AGCCCATAAC CCGGAAAGCA ACATGAAGCT AGCCAGTGGA
ATAGCGCCGG TACCGCGTAT GCTGGAAAGC GGTATAGCAG TAGCTTTGGG TACCGATGGA
GCTTCCAGTA ACAATAATCT GGACATGCTG CAGGAGATGC GCAGTTCTTC CTTTTTACAT
AAGGTAAACA CTATGGATCC CATGGTTTTG CCGGCTTACC AGGCTCTGGA GATGGCCACG
GCCAATGGAG CCATCAGCCT GGGGATGGGG AATGAGCTGG GACGATTGGA GCCGGGATAC
CGGGCGGATA TGATTATCAT GAATTTAAAG GAGGCCCACA TGACCCCCCG TTATGACCTT
CTGGCCAATA TCGTTTATTC CGCTCAGGCC AGCGATGTGA ATAGCGTGAT AATTGATGGA
AAAATTGTGA TGGAAAACCG GGAAATCAAG ACTTTTGACG AGCAGGAAGT GCTGGCTAAA
GCCCGGGAAA CAGCCCGGAA ATTGGTGGGG AAGTAA
 
Protein sequence
MRILLDNISI IPVSGSNSFI EKGYLLIEDV FIKELGTGKA PEGEFDHIID GENQVLLPGF 
INAHTHAAMT LLRGYADDLP LMEWLENKIW PLEAKLTPED IYWGTMLAIV EMIKSGTTTF
NDMYFCMDEV ARAVELSGMR AVLARGMVGV GPESEQAIED SRELIGKWQG QAGGRISFRL
GPHAPYTCPP AYLERVMQLS DELQAGIHIH VAETRVEYED ILKQYGKTPV SHLESLGLFQ
GRQVLAAHCV HLNEEEIGIL HQYQVGVAHN PESNMKLASG IAPVPRMLES GIAVALGTDG
ASSNNNLDML QEMRSSSFLH KVNTMDPMVL PAYQALEMAT ANGAISLGMG NELGRLEPGY
RADMIIMNLK EAHMTPRYDL LANIVYSAQA SDVNSVIIDG KIVMENREIK TFDEQEVLAK
ARETARKLVG K