Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0780 |
Symbol | |
ID | 4282827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 887553 |
End bp | 888215 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638137651 |
Product | L-fuculose phosphate aldolase |
Protein accession | YP_753472 |
Protein GI | 114566318 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.509551 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAATAGAT TGCAATACCA GCAGGAAAGG AATGAGCTTT TGCAAACTGC TCAGGAGATA TTTTCCTCCG GTCTGGTAAG CGGAACCTGG GGTAATGTGA GTTTAAGGGT GTCCGGCCAG GGTCTGATGC TTATCACCCC CAGTGGAATG GATTATAATC AGATGGATGC GGAAGATATG GTTTTGCTTG ATGGAGAAGA AAAGGTTTTG GCCGGTAAAT ATAAACCATC GGTGGAAACC CCGCTGCATC TGGGAATATA TAAAAAACGC CCGGAAATAA ACGCTATTGT ACATGTTCAT AGTCTTTATG CCACGGCCTT TGCGGTGGCC CGGCAGAATA TCCCGGTAAT ATTGGAAGAG GCGGCTCAGG TAATTGGGCA TGAGGTTAGG GTAGCCCCCT ATGCCCTCTG CGGTTCACGG CAATTGGCGG AAAATGTCCT CAAGGTCCTG GGCAAGGACA AAAGGGCGGT TTTGCTGGCC AATCACGGGC TGTTGGGTTT GGGGGGGAAT TTGCCGGAGG CCCTGCGGGT TTGCCTGGTA GCTGAGCGCA CGGCCCGCAT TGCCATTTAT TCTCGTATAC TGGGACCGTT GCATTCCCTT AGAGCTGAAG ATATTTTAAG CCTGCGCCAG GTTTTTGAGA ATTATGGGCA GAAGAAGGAT TGA
|
Protein sequence | MNRLQYQQER NELLQTAQEI FSSGLVSGTW GNVSLRVSGQ GLMLITPSGM DYNQMDAEDM VLLDGEEKVL AGKYKPSVET PLHLGIYKKR PEINAIVHVH SLYATAFAVA RQNIPVILEE AAQVIGHEVR VAPYALCGSR QLAENVLKVL GKDKRAVLLA NHGLLGLGGN LPEALRVCLV AERTARIAIY SRILGPLHSL RAEDILSLRQ VFENYGQKKD
|
| |