| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0528 |
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| Symbol | |
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| ID | 4281257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 626559 |
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| End bp | 627065 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638137412 |
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| Product | shikimate kinase |
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| Protein accession | YP_753233 |
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| Protein GI | 114566079 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0703] Shikimate kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.361692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGAAAAA ATATAGTATT AATCGGTTTT ATGGGTACAG GAAAGAGTTC TGTTGGTCAA
AGGCTAGCGG AAAAGCTGAA AATGGCTTTT ATTGATATGG ATCGGGAGAT TGAGAAGATT
ACCGGTTTGT CCATCAATCA AATCTTTCGC AAGCATGGGG AAATCAGATT TCGTTCGGAG
GAAAAGCTGC TGGCACAAAA ACTTGGCCAT GAAAGCAACC TGGTTATTGC TACCGGAGGA
GGGGTAGTAT TAAGACAGGA GAATATTGAG GCCTTGAGAG AAAATGGTAT TTTGATTTGT
CTTGAGGCTA GTCCCGAAGA AATTCTCAAA CGAGTAAAGC GAAAAAAAGC TAGCCGCCCT
CTAATAAAAA AGGAGTATGG GGAAGAGGAA ATTAAAGCCA TGCTGGAAGA AAGGGAGGCT
TTTTATGCCT GTACTGATTT CCGCATCAAT ACAAATAATA AGGAACCCCG GGAGATTGTT
GAAGAAATAA CCCGGCGCTT AAGGTAG
|
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| Protein sequence | MGKNIVLIGF MGTGKSSVGQ RLAEKLKMAF IDMDREIEKI TGLSINQIFR KHGEIRFRSE
EKLLAQKLGH ESNLVIATGG GVVLRQENIE ALRENGILIC LEASPEEILK RVKRKKASRP
LIKKEYGEEE IKAMLEEREA FYACTDFRIN TNNKEPREIV EEITRRLR
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