Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0417 |
Symbol | |
ID | 4281250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 495252 |
End bp | 496325 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638137305 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_753126 |
Protein GI | 114565972 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01463] methyltransferase, MtaA/CmuA family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGCTG TCCCCAAGGA TGAAATGACA CCGCTCGAAA GAATGGCCGC TTTTGCCGCA GGCAAGCCGT ATGACCGGAT TCCCTGCAGC AGTTTTAGCG GTGAAACTGC CTGCCATTTT ATCGGAACCA CGGTATCAGA GTACCGTCAT TCCGCTAAAT TGATGGCTAG AGTGGAAACG GTTACATATA AGATGTTTGG TCATGACGGT GCCGGAGTCG GCCCAGGATT CCTGGCCCTG GCCGAAGCCA TGGGAACCGA ACTAAAATAT CCGGAAGACA ATATACCCTT CGTGGCCAAT CCTGTTCTGA AAAACTGGGA TGATTTTGAT AAGCTGGAAC CCGCTGACCC TCATAAGGAT GGAAAGTTGC CCATCTATTT AGAAGCCCTG GCCATGATCA AGGATGCTAT CGGGGATGAA GTTCCAATAG GTAGTAGTGT CGGGGGACCA TTTACCACTG CCGCATTAGT CAGAGGAACC GAGAATTTTC TGAAGGACTT GCGGCGTAAT CCGGAGATGG CTCATCGTCT GCTACAACTG GTTACTAATA CTACCTTGAA TTATATAGAT GCAGTAATGG ATATGGGCTG TAGCGTAAGT ATTGGCGACC CGACCGCATC GGGAAGCCTG CTAAGTGTTA AACAGTTTAG AGAATTCGCC AAACCTTACC TTTCTAAACT GGCAGATCGG GTAATAGAGC GGACCGGCAA AGGCCCAATG CTGCATATTT GTGGTGATTC AACTCCTATT TGGTCGGATA TGGCCGATAC CGGAGCGCCA ACCCTCAGCC TGGACAATGT TATCGATTTG GCTGAAGCCA AAAAGGTGGT GGGGGAACGG GTTTGTATTA TGGGCAATGT TAAACCGATT GATACCATTA TGAAAGGAAG CCATCAACAG ATCGAGGCCG AAGTTAAGGA ATGTCTGCGC AAGGCCTATG ACAGCCCCAA AGGCTTTATT CTGGCGGTCG GTTGCCAGGT CCCACTGGGA ACTACAGCCG ATAATTTTAT GTGTTTTATG AATGCCGCTC GTAAATATGG GCGATATCCA TTAAACCCGG ATAATTTTAT TTAA
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Protein sequence | MNAVPKDEMT PLERMAAFAA GKPYDRIPCS SFSGETACHF IGTTVSEYRH SAKLMARVET VTYKMFGHDG AGVGPGFLAL AEAMGTELKY PEDNIPFVAN PVLKNWDDFD KLEPADPHKD GKLPIYLEAL AMIKDAIGDE VPIGSSVGGP FTTAALVRGT ENFLKDLRRN PEMAHRLLQL VTNTTLNYID AVMDMGCSVS IGDPTASGSL LSVKQFREFA KPYLSKLADR VIERTGKGPM LHICGDSTPI WSDMADTGAP TLSLDNVIDL AEAKKVVGER VCIMGNVKPI DTIMKGSHQQ IEAEVKECLR KAYDSPKGFI LAVGCQVPLG TTADNFMCFM NAARKYGRYP LNPDNFI
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