Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0369 |
Symbol | |
ID | 4281203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 441936 |
End bp | 443921 |
Gene Length | 1986 bp |
Protein Length | 661 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638137259 |
Product | DNA ligase (NAD(+)) |
Protein accession | YP_753080 |
Protein GI | 114565926 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGGTCA GTTCCCGGAT AAAGGAGCTC AGGGAAGAGA TGCAAAAGCA TGATTACCAC TATTACATTT TAGATGCCCC GCTAATAAGT GACTCCGGCT ATGATCGCCT GATGCAGGAA CTGAAAAAGC TGGAGGAGGA ATACCCGCAG TATATAACCG CCGATTCACC TACGCAGCGG GTAGCGGGCA AGGCTTCGGA AAAGTTCTCC CCGGTAAGGC ACCGCTTTCC CCTCTTAAGC CTGGACAATG CCTTTTCCTA TCAGGATTTA TTGGAGTTTG ACCGCCGGAT AGGTCGGGTC GCCCGGACGC TGTCATATAT GGCAGAACTT AAAATAGATG GGGTTTCTAT CGCATTGGTT TATGAAAACG GGGTTTTGCT GAATGCTGCT ACCAGAGGGG ATGGTCTGGT GGGAGAGGAT GTAACAGCCA ACATCAGGAC AATAAAGACT ATCCCGCTTC GCTTGCGCCA TTCCCTGCCC CGGCTGGAAG TGCGCGGCGA AGTGTTTATG CCCAAACAGG AATTTATTCG ACTCAATGAG GAAAAAGAAG AAAAAGGGGA AAGGGTTTTT GCCAATCCCC GCAATGCCGC TGCTGGTTCA TTGCGGCAGC TCGATCCCCG GGTAACTGCC GGACGGGCTC TGTCTGCTTT CGTTTATGAC ATTATTTATA TGGAAGGACA AACTCTAGCG GAACAGCAAG AGGCCTGGCA TTTTATGCAG GAACTGGGCT TGCCGGTCAA TCCGGAGGTA CGCTTCTGCG CGGATATAAA TGCTGTTCTG GCTTTTACTG AGGAATATGC TGAAAAGCGA CATGAGCTTC CCTATGAGAT TGACGGGGTG GTGGTCAAGC TCAATACCCT GGCAGAACGG GAGGAGTTGG GGGCAACCGC TAGGAGTCCC CGTTGGGCGA TGGCCTACAA ATTCCCCGCC GAAGAAAAGG AAACCCGGCT CCTGGGCGTA GAAATAAATG TGGGGCGAAC CGGAATCATA GCTCCCACTG CTTTGCTGGA ACCGGTATTT TTGGCTGGAA CTACAGTTAG CCGGGCCAGT ATGCACAACT TTGATCTGAT CAAGGAAAAG GATCTGCGCA TCGGCGATAT GGTTTTACTG CATAAGGCGG GAGATATAAT TCCCGAAATC ATCGCTTCCC TCCCCGAAAA AAGAAGCGGG GAGGAGCGGG TGATAACGCC TCCGGAAAAC TGTCCCGCTT GTGATAGCAA GGTGGCGCGT TTTGCCGGAG AAGTGGCTTA TCGTTGCGAA AACATCAATT GCCCGGCCCG GCTCAAGGAA AGCCTTATCT TTTTTGCCTC CCGCGGGGCC ATGGATATAG ATGGATTAGG TTCAGCTGTA ATCGAACAGT TGGTAAACAA AGATATGGTA AAACGAATTG ACGACTTGTA TCGCTTACGG GAAGAGGAGA TCACTGCTTT GGAAAGAATG GGGCCAAAAT CCGCCGCCAA TTTAATCAAA GCCATTAATG AGAGCAAATC CCGTCCCCTC TCCCGCCTGC TTACCGCCCT GGGAATAAGG CATATAGGAG CCAGGAGCGC TAAAATTCTG AGCCGCCATA TTCATGATAT AGATGATTTT TATAAGTTAG GGGTAGAGAA TCTAACCAGC ATTCCGGAAA TCGGACCCAA GATGGCCGAG TCTATGGTTA ATTTCTTTGC TGAGCCCCGG AACCGGGAGA CCATAGAAGA TCTGAAAGAC CTGGGGGTTA ATACCCGGGA GGAGGCCATC GAGGCCGGAG AGCAACTGCT GCAGGGGAAG ACCTTTGTGC TTACCGGCAC CCTGCCCAGC CTGACCCGCC AGCAGGCCAG CGAGATGATT GAAAGCCGGG GAGGAAAAGT GAGCAGTAGT GTCAGTAAGA AAACCTCCTA TGTCGTGGCT GGCGATGATC CGGGCAGCAA GCTGGACAAA GCACTGCAAC TGGAATTGAC CATACTGGAC GAAGCAGGTT TTTTAAACCT CTTGGGATTA TCTTAG
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Protein sequence | MEVSSRIKEL REEMQKHDYH YYILDAPLIS DSGYDRLMQE LKKLEEEYPQ YITADSPTQR VAGKASEKFS PVRHRFPLLS LDNAFSYQDL LEFDRRIGRV ARTLSYMAEL KIDGVSIALV YENGVLLNAA TRGDGLVGED VTANIRTIKT IPLRLRHSLP RLEVRGEVFM PKQEFIRLNE EKEEKGERVF ANPRNAAAGS LRQLDPRVTA GRALSAFVYD IIYMEGQTLA EQQEAWHFMQ ELGLPVNPEV RFCADINAVL AFTEEYAEKR HELPYEIDGV VVKLNTLAER EELGATARSP RWAMAYKFPA EEKETRLLGV EINVGRTGII APTALLEPVF LAGTTVSRAS MHNFDLIKEK DLRIGDMVLL HKAGDIIPEI IASLPEKRSG EERVITPPEN CPACDSKVAR FAGEVAYRCE NINCPARLKE SLIFFASRGA MDIDGLGSAV IEQLVNKDMV KRIDDLYRLR EEEITALERM GPKSAANLIK AINESKSRPL SRLLTALGIR HIGARSAKIL SRHIHDIDDF YKLGVENLTS IPEIGPKMAE SMVNFFAEPR NRETIEDLKD LGVNTREEAI EAGEQLLQGK TFVLTGTLPS LTRQQASEMI ESRGGKVSSS VSKKTSYVVA GDDPGSKLDK ALQLELTILD EAGFLNLLGL S
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