Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0343 |
Symbol | |
ID | 4281337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 408144 |
End bp | 410060 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638137229 |
Product | transmembrane sensor-like domain-containing protein |
Protein accession | YP_753055 |
Protein GI | 114565901 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4252] Predicted transmembrane sensor domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATTTAT CTTATGAATC TCACCCGCTT GAAGAAAAAA AGCCCCGAAG AATCTTCTCC GGCATAAGCC ATAATAGATT CTTTATTCCT ATCCTGCTTT TTTTGCTCTT GCAGGGTCTG GTTATGCTGG GTTTCTTTAC CCGCAGTGAC CTGGGACTCT ATGACGCCTT TTTCCGGCTT AAGGGAGCTT CAAATCCCGG CGAAAAAGTA GTAATAGTGG CCATAGACGA TTCCTCCATC TCCCGCCTGG GGCCACCGGC CTGGCCCCGT TCCGTTCACG CTCGTTTGCT GGAAAAACTG AAAGAGGCCC GGGCGGTAAG CTTTGACCTT ACTTTCAACT CTGCTCAGGA AGCCCGTGAG GACCAGGCTT TCGCCTCAGC CATTCAAAAA CATGGCCAGG TAATACTGGC AGCCAAGTTT ACCTTTGAAA AAGATGAAAG TGGCGAACTG GTTCAGGGTT TTGAGCCCCC CCTGCAGGAG CTCATGTCGG GTGCCGCTGG CCTGGGCTTT GTCAACACTC CAACTGATAT CGACCAGAGG GTAAGACGCT CCACTCTGGT CGATGTTAAT TACTTCGAAG TTCCCTTTCC CAGCCTGGCC ATTGCTACCG CCATGGTAGC CCAGGACATT AGCTATGAAG AACTTAAACT AGAAGCAGAT CGTCTACTGC TGGGGAAAAC AGAAATACCG TTAAGCCCAC TAAACCAGGC TATGGTAAAA TTCTGGGGAC CGAAGGCCAC ATTCAAGACT ATAAGCTATG CCGATGTTAT AGAGGAAAAA ATCCCCCCCG CCTATTTCCA AGACAAAATT GTTCTTATCG GAAGCATTAC ACCGGAGGAT CATGACTTTG TGACCACCCC CTATACCACC AGCAATATGG TAAAGGGCGG AGCCCTGGAC ACCCCGGGGG TGGAAATACA CGCTTCCATT GTCCAGACTT TTCTAGAAGA CAGCTGGTAC CGAGAGGCCG AAAAGCCTTT TAATATGGCC TTTCTTTTGC TGGCAGGCCT CCTCACTTCA CTGGTGGTCA GAGGACGCGG TCCCTGGAAG GGGCTAATTG GAACTGTTCT GGTAACCCTG GCAAGCATTG CTCTGGTTTA TGGTCTGTGG GAATACCAGC GAATATGGCT CAGCCTGGCT GCTCCCCTGG CCCTTATCTT GCTGACTTAT GTGGTGGTAA CGGCCACCGA ATTTATTCGA GCTGAACTGG GAAGACGTAA AACCAAAGCC ATGTTTTCTC GCTACGTTTC CGCCGATGTG GTGGATGAAC TCTTGAAAAA TCCGGATGAA ATTTCCCTGG GTGGCAAAAA ACAGGTGGTT ACTATCATGT TCGCAGATAT CCGCGGCTTT ACCGCCTTCA GCGAAAATAA GGACCCAGTG GATGTAATCA ACCGGCTCAA TGAATACCTG ACTGCGATGA CCGACTCCAT TCAAAGCCAT GGCGGCACCC TGGATAAATA CCTGGGAGAT GGTCTCATGG CCTTTTTCGG AGCCCCGGTC TATTTTGAGG ATCATGTGGA GAGGGCCATC AAGGTGGCCC GGGAAATCCA GGTTAAGGTG GCAGAATTAA ATCATAAGTG GGCTGAACAG GGCGCTGTAC CTCTGCTGGT AGCCGTAGGC ATCAACACCG GTCCGGTGGT GGTGGGCAAT GTAGGCAGCC CGGAACGGAT GGATTATACA CTAATAGGAG AAGATGCCAA CCTGGCTTCT CGAGTTGAAG CCTTGACCAA GCTCTTTGAA ACCCTGGTAT TAGTTTCCGA GCGCTCCTAC GATCTGCTTC CAGAAGGGGA AACCAAAGCT TCTCTGCATT ATGTAGGCGA AGAACTGGTA AAGGGTTTCA CCCATCCCAT CAAGGTTTAT TCATTTACTG ATTTGGATTT GCATTTTGAA AAATCTCAGG ATAAGGGCTT TAAGTAA
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Protein sequence | MNLSYESHPL EEKKPRRIFS GISHNRFFIP ILLFLLLQGL VMLGFFTRSD LGLYDAFFRL KGASNPGEKV VIVAIDDSSI SRLGPPAWPR SVHARLLEKL KEARAVSFDL TFNSAQEARE DQAFASAIQK HGQVILAAKF TFEKDESGEL VQGFEPPLQE LMSGAAGLGF VNTPTDIDQR VRRSTLVDVN YFEVPFPSLA IATAMVAQDI SYEELKLEAD RLLLGKTEIP LSPLNQAMVK FWGPKATFKT ISYADVIEEK IPPAYFQDKI VLIGSITPED HDFVTTPYTT SNMVKGGALD TPGVEIHASI VQTFLEDSWY REAEKPFNMA FLLLAGLLTS LVVRGRGPWK GLIGTVLVTL ASIALVYGLW EYQRIWLSLA APLALILLTY VVVTATEFIR AELGRRKTKA MFSRYVSADV VDELLKNPDE ISLGGKKQVV TIMFADIRGF TAFSENKDPV DVINRLNEYL TAMTDSIQSH GGTLDKYLGD GLMAFFGAPV YFEDHVERAI KVAREIQVKV AELNHKWAEQ GAVPLLVAVG INTGPVVVGN VGSPERMDYT LIGEDANLAS RVEALTKLFE TLVLVSERSY DLLPEGETKA SLHYVGEELV KGFTHPIKVY SFTDLDLHFE KSQDKGFK
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