Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0296 |
Symbol | |
ID | 4281512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 346076 |
End bp | 346483 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638137187 |
Product | transcriptional regulator |
Protein accession | YP_753013 |
Protein GI | 114565859 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00196972 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGCCT TGCCTATACG CGACAGCAAT AATAAATTGT TGTTTATCGT GTTTATTTTT ATCACCTCCA GATATTATCA GGACAGAGAA GAAATTATTA AAGGAAAAGA ATACATAGAC AATCATTGGC AGGAGGAGTT TGACATAGAT AAGCTGGCGG GTATTGTTCA CATGAGCAGG TATCACTATA CCCGTTTGTT TAAGCAGCAT GCGGGCATGA CCCCCTACAA CTATTATCAA GAAGTAAAGA TTGGTAAGCT CAAGGAAAAA CTATGTGATA CCGATCTATC CATAACCCAG GTCTTTGAGG AATGCGGCGT GGATTATAAT GGGAATTTGG CAAAAAAATT CAAAGAAAAG TTAGGCATGA CCCCTTCTCA ATATCGAACA ATGATGACCC AAAAATAA
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Protein sequence | MTALPIRDSN NKLLFIVFIF ITSRYYQDRE EIIKGKEYID NHWQEEFDID KLAGIVHMSR YHYTRLFKQH AGMTPYNYYQ EVKIGKLKEK LCDTDLSITQ VFEECGVDYN GNLAKKFKEK LGMTPSQYRT MMTQK
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