Gene Swol_0296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0296 
Symbol 
ID4281512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp346076 
End bp346483 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content38% 
IMG OID638137187 
Producttranscriptional regulator 
Protein accessionYP_753013 
Protein GI114565859 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00196972 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCCT TGCCTATACG CGACAGCAAT AATAAATTGT TGTTTATCGT GTTTATTTTT 
ATCACCTCCA GATATTATCA GGACAGAGAA GAAATTATTA AAGGAAAAGA ATACATAGAC
AATCATTGGC AGGAGGAGTT TGACATAGAT AAGCTGGCGG GTATTGTTCA CATGAGCAGG
TATCACTATA CCCGTTTGTT TAAGCAGCAT GCGGGCATGA CCCCCTACAA CTATTATCAA
GAAGTAAAGA TTGGTAAGCT CAAGGAAAAA CTATGTGATA CCGATCTATC CATAACCCAG
GTCTTTGAGG AATGCGGCGT GGATTATAAT GGGAATTTGG CAAAAAAATT CAAAGAAAAG
TTAGGCATGA CCCCTTCTCA ATATCGAACA ATGATGACCC AAAAATAA
 
Protein sequence
MTALPIRDSN NKLLFIVFIF ITSRYYQDRE EIIKGKEYID NHWQEEFDID KLAGIVHMSR 
YHYTRLFKQH AGMTPYNYYQ EVKIGKLKEK LCDTDLSITQ VFEECGVDYN GNLAKKFKEK
LGMTPSQYRT MMTQK