| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0254 |
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| Symbol | |
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| ID | 4281433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 295471 |
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| End bp | 297276 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638137149 |
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| Product | excinuclease ABC, C subunit |
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| Protein accession | YP_752975 |
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| Protein GI | 114565821 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGATG AGATGCTGAA GGAAAGATTA AAAAAGGTGC CGCTCCAACC GGGGGTATAC
TTGTTCAAAA ACCAGGAGGG GCAGGTGCTC TATGTGGGAA AAGCCCGGGT TCTTCGCCAG
CGAATGCGCT CCTATTTTCA AGCCCCGGAG CGAATGCATC CCAAGGTAAA GGCGATGATG
GCCTGGGTAA GTGATTTTGA CTTTATCGTC ACCCACAGTG AAATGGAAGC TCTCATTCTG
GAAAACAACC TTATAAAAAG CTATAAGCCC AGGTATAATA TCGATTTGCG CGATGATAAA
AGCTATCCTT ATATCAAAGT CACTGTCGCC GATAAATTTC CGCGGGTTTA CCTGGCCCGG
GAAAAAAAAG ACGGAGTATC GCGCTACTTT GGACCTTATA CCGATGTTAC TTCCCTGCGC
GATACGCTCA AGCTGCTCAA CGGCGTTTTC GGGCTGCGCA GTTGCCGGAC TATGAAGTCC
CGGCGCCGGC CCTGTCTCAA CCGCGACATG GGTAAATGTC TCTCCCCTTG CAGCGGTGAA
ATTTCAGAAG AAGAATACAG CCAGAAGGTT CAAGCCTTAA TCACTTTTCT GGAGGGTGAT
TTTCAAGAGA TAGTCCGGGA AAAAGAAAAA GAAATGGCTA TGGCCGCCAG GAGTCTGGAG
TTCGAAAAAG CCGCCCGCCT GCGGGATCAG ATCCAATCCC TGCGCCAGTT GGGTGAAAAA
CAAAAGATTG AGCTGGCTTC ACCCTATGAA CTGGACCTGG TGGGGATGCT AAGCGGGGAA
AAGGAGAACC TGGTCCTGGT TTTTAAAGTC CGTTCGGGAA AGATAGTAGG CAAAGATACT
TTCTGGCTGA AGCGCCCTAT CCAGGAAGAT GAGAATGAGG CCATGGAATT TTTTATTAAA
CACTATTATG ATGAAAACCC TGATATTCCA CCGGAGATAC TCTTGAGCCA CCTGCCTTCT
GAGTCCAAAC TGGTGGAGGC CTGGCTGAAA TCCAGGGTCT CCCACCGGGT AGAACTCCGG
GTTCCGCAAA GAGGAGAAAA GAAACAGGTT CTCAATATGC TGCTGGAAAA TGCTCGTTTA
CTCCTGGAGG AAAAGCAGCG GGAAGAGAAT AAGCAGCTCG CCGCTCTCTC GCATTTGGCG
CGGGTTCTGG ACCTGGAAGT GGTGCCTAAT CGCCTGGAAT GTTTTGATGT ATCTCATCTG
GCCGGGGAGG AAACAGTGGC CTCTATGGTG GTTTTTGTCG GAGGCCAACC GGAGAAAAAG
GCTTATCGCC ATTTTAAAAT CAGAACTCAA CAGAATAATG ATACTGCCTC ACTGGCTGAA
ACCGTTAGAA GGCGTTTGGA GAATGCCCGC CAGGCTAATC CAGCTTTTTT GCCGGAGCCG
GATTTAATAC TGGTCGATGG TGGATTAGGA CAGGTTAATG CCGTAGCAGC AGTTTTGCAG
GAAATGAATC TGGATATCCC GCTGTTTGCT TTGGCTGAAA AGAATGAGGA GATATACCGG
CCAGGTAAAA GCCAGCCACT GGTATTGGCG GCCCGGGATA ATGGACTGCA ATTGCTGCAG
AGGCTTCGGG ATGAAGCCCA TCGTTTTGCT ATTGAATATA ACCGGAAGAG AAGGGCAAAA
AAAATCAGGT CTTCTGCTCT GGACGAAATA CCGGGAATAG GGAAGCAGAG AAAGAAGAAC
CTGCTGGTTC ATTTCACTTC GGTGGCCAAA ATTAAGGAAG CTTCACTGGA TGAAATAGCG
GCCGTTCCGG GAATGAACCG GAAAGCGGCA CTGGCGGTAA TAGAGTTCTT CCATAATCAG
GACTGA
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| Protein sequence | MGDEMLKERL KKVPLQPGVY LFKNQEGQVL YVGKARVLRQ RMRSYFQAPE RMHPKVKAMM
AWVSDFDFIV THSEMEALIL ENNLIKSYKP RYNIDLRDDK SYPYIKVTVA DKFPRVYLAR
EKKDGVSRYF GPYTDVTSLR DTLKLLNGVF GLRSCRTMKS RRRPCLNRDM GKCLSPCSGE
ISEEEYSQKV QALITFLEGD FQEIVREKEK EMAMAARSLE FEKAARLRDQ IQSLRQLGEK
QKIELASPYE LDLVGMLSGE KENLVLVFKV RSGKIVGKDT FWLKRPIQED ENEAMEFFIK
HYYDENPDIP PEILLSHLPS ESKLVEAWLK SRVSHRVELR VPQRGEKKQV LNMLLENARL
LLEEKQREEN KQLAALSHLA RVLDLEVVPN RLECFDVSHL AGEETVASMV VFVGGQPEKK
AYRHFKIRTQ QNNDTASLAE TVRRRLENAR QANPAFLPEP DLILVDGGLG QVNAVAAVLQ
EMNLDIPLFA LAEKNEEIYR PGKSQPLVLA ARDNGLQLLQ RLRDEAHRFA IEYNRKRRAK
KIRSSALDEI PGIGKQRKKN LLVHFTSVAK IKEASLDEIA AVPGMNRKAA LAVIEFFHNQ
D
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