| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0251 |
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| Symbol | |
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| ID | 4281430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 290439 |
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| End bp | 292436 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638137147 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_752973 |
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| Protein GI | 114565819 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00546906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGAAT TTAAATTACA TTCATCCTAT AAAGCGACCG GAGACCAGCC GCAGGCGATA
AAGCAGCTTC TGGACGGAGT GGCGGCAGGA TTTCGTGACC AGACCCTCTT GGGAGTAACC
GGTTCCGGTA AGACCTTTAC TATGGCCCGG ATTATAGAAG AGTTGCAGCG ACCGGCCCTG
GTTATGGCCC CTAATAAAAC CCTGGCCGGC CAGCTTTATT CCGAGTTCAA GCAGTTTTTC
CCGGATAATG CCGTGGAGTA TTTTATTAGC TACTATGATT ATTACCAGCC GGAGGCTTAT
GTTCCCCAGA CTGACACCTA TATTGAGAAG GATTCCTCCA TTAATGATGA GATAGACAAG
CTTCGCCATT CGGCTACAGC TGGCGTTTTA GAGAGGCGCG ATGTGATAAT AGTGGCCAGC
GTTTCCTGTA TTTATGGCCT GGGTGCTCCG GAGGATTACT ACTCCCTGGC CGTATCGCTG
CGTCCCGGAA TGGAAATAGC CCGGGATGAT CTTTTACGCC GTTTGGTGGA CAACCATTAT
GAACGCAATG ATTTTTCATT TTTCCGAGGG AACTTCCGGG CTCGCGGGGA TGTGGTGGAG
ATATTTCCCG CCTCCTCCAA TGAGAATGCT CTCCGAGTGG AGTTTTTCGG TGATGAAATC
GATCGCATTA TCGAATTTAA CCCCTTGAGC GGGGAAATCA TAGGCCGCCG TTTGCACAGC
ATGATATTTC CTGCTTCCCA TTTCGTCACC ACCCGGGAAC GGATGCTAGA AGCCGCCGGG
CAGATCGAGG AAGAACTGGC GCAGCAGTTG GCCCGCTTCA AAATGGAAGG CAAGCTGCTG
GAGGCGCAGA GGCTGGAGCA GAGAACGCGT TATGATTTGG AAATGATAAG AGAGATAGGT
TATTGCAAGG GGATTGAGAA TTATTCCCGT TATATTACGG GACGAGCCCC CGGCGAGCCG
CCCTATACCT TGCTGGACTT TTTCCCGGAT GATTTCCTGC TCTTTATCGA TGAGTCCCAT
ATTGGCGTGC CCCAGATTCG GGGTATGTAC GAGGGAGATC GCTCCCGCAA GCAAAACCTG
GTGGATTTTG GCTTTCGCCT GCCTTCCGCT CTGGACAACC GGCCTTTAAA GTTTGCCGAA
TTTCAGGAGA AGATTAATCA GGTGATTTAT GTCAGTGCCA CCCCGGCTGA TTATGAATTG
CAGCATAGCG TACAGGTGAG TGAGCAGATT ATCCGCCCGA CCGGACTGCT TGACCCGGAG
GTAGAGGTCA GGAGCAGCCA GAACCAGATT GATGATCTTA TGGCTGAAGC CCGGGCAGTG
GTGGAAAAGG GTTACCGGGT TCTGATAACC ACCCTGACCA AGAGGATGGC GGAAGACCTG
ACAGATTATT TGGCTGATAC AGGTTTAAAA GTGCGTTACA TGCATTCGGA CATAGATGCC
CTGCAAAGGT TGGAGATTTT GAGAGAATTA CGCAGCGGAG TTTTTGATGT TTTGGTGGGA
ATAAATCTGC TGCGGGAAGG TCTGGATCTG CCGGAAGTAG CCCTGGTAGC CATACTCGAT
GCGGATAAAG AGGGTTTTCT TCGCTCAACC CGCTCGCTGG TTCAGACTAT CGGCCGAGCC
GCCCGCAATG TTGAGGGCAA GGTGATAATG TATGCGGATG AAATCACCCT CTCAATGAAG
TCGGCTATAG ATGAAACCAA CCGCCGCCGT TTGAAACAAC TGGAGTATAA CCGGGAACAC
CATATTACTC CGGAAAGCAT CAGGAAGGCC ATATATGCTC CGGTAGAAGC AACTATTGCC
GAAGAGGCGG TAGAATACGA TATCCGCGAT TTTCAAAAAA TGGCCCGGGA GGAGAGGGAA
AAGCTCTTAC GGGAAATGGA AGCCGATATG TACCGGGCGG CAGAAACCCT GGAATTTGAA
AAGGCCGCCC GTCTACGGGA CAGTATTCGG GAATTGCAGC AACCGGTCAA GAAAAGCAGG
AGACGGGGGA AAAGATGA
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| Protein sequence | MPEFKLHSSY KATGDQPQAI KQLLDGVAAG FRDQTLLGVT GSGKTFTMAR IIEELQRPAL
VMAPNKTLAG QLYSEFKQFF PDNAVEYFIS YYDYYQPEAY VPQTDTYIEK DSSINDEIDK
LRHSATAGVL ERRDVIIVAS VSCIYGLGAP EDYYSLAVSL RPGMEIARDD LLRRLVDNHY
ERNDFSFFRG NFRARGDVVE IFPASSNENA LRVEFFGDEI DRIIEFNPLS GEIIGRRLHS
MIFPASHFVT TRERMLEAAG QIEEELAQQL ARFKMEGKLL EAQRLEQRTR YDLEMIREIG
YCKGIENYSR YITGRAPGEP PYTLLDFFPD DFLLFIDESH IGVPQIRGMY EGDRSRKQNL
VDFGFRLPSA LDNRPLKFAE FQEKINQVIY VSATPADYEL QHSVQVSEQI IRPTGLLDPE
VEVRSSQNQI DDLMAEARAV VEKGYRVLIT TLTKRMAEDL TDYLADTGLK VRYMHSDIDA
LQRLEILREL RSGVFDVLVG INLLREGLDL PEVALVAILD ADKEGFLRST RSLVQTIGRA
ARNVEGKVIM YADEITLSMK SAIDETNRRR LKQLEYNREH HITPESIRKA IYAPVEATIA
EEAVEYDIRD FQKMAREERE KLLREMEADM YRAAETLEFE KAARLRDSIR ELQQPVKKSR
RRGKR
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