Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0229 |
Symbol | |
ID | 4281633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 270303 |
End bp | 271472 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638137126 |
Product | DegT/DnrJ/EryC1/StrS aminotransferase |
Protein accession | YP_752952 |
Protein GI | 114565798 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | [TIGR03588] UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00533175 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGATAG ATAGTTTTAT TCCTTATGGC AGGCAAAACA TAGAGCAGGA TGATATTGAT GCGGTTATTG AAGTTTTACG CTCTGCTTGG ATTACCCAGG GACCCTGGGG AGAGGAGTTC GAAAAACAGG TAGCTACCTA CTGCGGGGTG TCCTATGCGG TGGCTTTTAA CAGCGGCACC TCGGCTTTGC ATGCCGCCAT ATATGCGGCG GGGATAGGGC CAGGGGATGA AGTGATTACT TCCCCCGTAA CTTTTCTGGC CACGGCCAAT GCGGCTGTTT ACACAGGTGC CCGCCCGGTT TTTGTGGATA TGGATATTAA CAGCTATTGT ATTGACCCGC AGCTGCTTGA AGCGGCTATT ACTCCTCGCA GCCGGGCCAT CGTTCCGGTG GATTATGCCG GTTATCCGGT GGATATAAGC GTGATAAAGG AAATAGCCCG GAGGCATAAT CTCCTGATTA TAGAGGATGC TGCTCATGCC CTGGGGGCGC GGAGGCAGGG GCGAGCGGTA GGCCAGGATG CGGATATGAG TATCTTGAGT TTCCACCCGG TAAAACATAT TACTACCGGG GAAGGGGGAA TAGTGCTGAC GGATAACCCG GAGCTGCAGG AGCGTTTGCG GCAGTTTCGC AGCCATGGAA TAGTGCGTGA TGCCTCTCGG ATGATGGAAA ACCATGGTCC CTGGTACTAT GAAATGCAGA GCCTGGGCTA TAATTTCCGC TTAAGCGACA TCCAGTCGGC CCTGGGCATT TCCCAGTTGA AGAAGTTGGA GACTTTTGTG GAGGAAAGGC AGCGGATAGC TTGCTATTAT GATCAGGCCT TTGCTGGCAT TAAGCAGCTG CATACTCCGC CACGCCCGGC TGCTGGCGAT CGCCATGCTT ATCATCTCTA TCCTTTGCTC CTGTCTCCCG GGATTGACCG CCAGGAAGTA TTCTCCTACC TGCGGGAGCG AAAAATCGGG GTGCAGGTAC ATTATATTCC GGTGCACCTC CAGCCTTACT ATCGTAAAAA TTATGGCTAT GGCCCAGGTG ATTTTCCGGT GGCGGAGGAT TTCTACCGGC GTGAAATCAG CTTGCCCATT TTTCCGGGAT TGAAACGGGA GGAACAGGAT TATGTGATAC ATCATGTTTG TTCGTCGGTC GTCGGACATC GGAAAACGGA GGGCGGATAA
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Protein sequence | MEIDSFIPYG RQNIEQDDID AVIEVLRSAW ITQGPWGEEF EKQVATYCGV SYAVAFNSGT SALHAAIYAA GIGPGDEVIT SPVTFLATAN AAVYTGARPV FVDMDINSYC IDPQLLEAAI TPRSRAIVPV DYAGYPVDIS VIKEIARRHN LLIIEDAAHA LGARRQGRAV GQDADMSILS FHPVKHITTG EGGIVLTDNP ELQERLRQFR SHGIVRDASR MMENHGPWYY EMQSLGYNFR LSDIQSALGI SQLKKLETFV EERQRIACYY DQAFAGIKQL HTPPRPAAGD RHAYHLYPLL LSPGIDRQEV FSYLRERKIG VQVHYIPVHL QPYYRKNYGY GPGDFPVAED FYRREISLPI FPGLKREEQD YVIHHVCSSV VGHRKTEGG
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