Gene Swol_0184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0184 
Symbol 
ID4281333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp227640 
End bp228773 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content52% 
IMG OID638137081 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_752907 
Protein GI114565753 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0714598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTAG GAAAAGTTAT GACGGTTTTT GGTACCCGGC CGGAAGCGAT TAAGATGGCT 
CCGGTAATTA AGGAATTGAA AAAAGTAAAG GACATAGAAA CGGTGGTAGC GGTAACGGCG 
CAGCACCGGG AGATGTTGGA TCAGGTTTTA CAGCTTTTTG ATATCACACC AGATTATGAC 
CTAAACCTTA TGGAAGAAAA ACAAGACCTC TACAGTATTA CCACCGGAGT TCTGAACGGG 
ATGAAGGGGA TACTGGCAAA GGAGCAGCCT GAGCTGGTTC TGGTACATGG TGATACTACC 
ACCACTTTTG CAGCGGCCCT GGCGGCCTTT TACCAGAGGA TTCCGGTAGG TCATGTGGAA 
GCCGGCCTGC GTACGCGGAA CAAGTACTCA CCTTATCCTG AGGAAATGAA CCGTACCCTG 
GCGGGTCGCC TGGCAGAGTT GCATTTTGCT CCCACTGATA CCGCTCGGGA GAATCTTTTA 
AATGAAGGGA CCGGTAGTTT CAAGATATGG GTTACCGGCA ACACGGTTAT TGATGCTCTG 
CTGGATACTA TCCGTCCTGA TTATGAGTTT GGTTCTGAGC TTGAAGAAAT AGATTTATCC 
AAGCGCCTGC TCCTGGTTAC CACCCACCGC CGGGAGAATT GGGGTCGTCC CATGCGGGAG 
GTCTATCAGG CTTTAATTGA CCTGGTGGAT GAATTCCCGG ATGTAGCGGT GGTATTTCCG 
GTTCACCGTA ATCCGGTAGT AAGAGATGTG GCCCGGGAGA TGCTGGAGGG GCGGGAGCGT 
TTTTACCTTA TTGAGCCCAT GGATTACGAG CCTTTTGCCC ATCTGATGAA TTGTTGTTAC 
ATGGTTTTAA CCGATTCCGG CGGTATGCAG GAGGAAGCTC CTTCCCTGGG CAAACCGGTT 
CTGGTTCTCC GGGACACCAC CGAGCGGCCG GAGGCCCTGC AAGCCGGGAC GGTGAAGCTG 
GTGGGTACGG TACGAGAGAA GATTTATAAT GAGGCCCGGC TGCTCCTTAG TAGCAGGGGA 
GAATATGAGA AAATGGCCCG GGCCATCAAC CCGTATGGGG ATGGGCAGGC GGCAATTCGA 
ATCGTAGATG TGATCAAGGA TTTTCTCTAT GTGCGCATCG GCGCCCAGGG TTAA
 
Protein sequence
MRLGKVMTVF GTRPEAIKMA PVIKELKKVK DIETVVAVTA QHREMLDQVL QLFDITPDYD 
LNLMEEKQDL YSITTGVLNG MKGILAKEQP ELVLVHGDTT TTFAAALAAF YQRIPVGHVE 
AGLRTRNKYS PYPEEMNRTL AGRLAELHFA PTDTARENLL NEGTGSFKIW VTGNTVIDAL 
LDTIRPDYEF GSELEEIDLS KRLLLVTTHR RENWGRPMRE VYQALIDLVD EFPDVAVVFP 
VHRNPVVRDV AREMLEGRER FYLIEPMDYE PFAHLMNCCY MVLTDSGGMQ EEAPSLGKPV 
LVLRDTTERP EALQAGTVKL VGTVREKIYN EARLLLSSRG EYEKMARAIN PYGDGQAAIR 
IVDVIKDFLY VRIGAQG