Gene Swol_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0163 
Symbol 
ID4281807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp189634 
End bp192804 
Gene Length3171 bp 
Protein Length1056 aa 
Translation table11 
GC content47% 
IMG OID638137060 
Producthypothetical protein 
Protein accessionYP_752886 
Protein GI114565732 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.000567499 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACA GGCTGCAATC TATTTTGGCA CTAATGCTCA CTGTGGCTTT GCTGTTTTCA 
GGGCTTTGTC TTCCGCAAAC AGCCTGGGCA GCAGATGACA AAACACCGGA AGAGTTGGAG 
ATAACCTGGC GAATTAAGGC CAATGCTGAT CACGCCTGGT CGAGCGAGAG TGCCAGGGAA 
AATGGCAAGG TTTATGCTCG CTATAATCTT AATGATTCCT TTATGCTTGA TTTAGCCGGC 
ACGACCGTTT TGAGCAGAAC CGGAATATCA TGGGGTGGCA ACCCTTATTT TCAACCGATT 
ACTGAAAACG AATATAGCAG GAGTTGTGCG GGGGGCGGAA CTTACACTAC CTGGTACCTT 
AGCGAACTCC AACGCTGGAC GGAAAAAGGT TCTGAAAAAA AGGATTTCGA AAGCACAACG 
GTCGAGAATT GGCAGTATCG CTGGCCGGGT AAGGAGCATG AAGGGGCCGA TGATAACCCT 
ATCCCATGGT TGGAAATTAT ACCGCCAGAG TCGGATAATG AACCCATCCG TTACCGGATA 
TGCCTTGAGC CCTTCTTTTT TATTGATTAT GACACAGCTG ATGAATATTT TGAAACTACG 
GGTACTATTC ATAGCAATTG GACCGATTGG GAGGGAAGCC ATTCCGAAAC CGGGGAACTG 
GGAAACCATG CTGGGGGTAT TACTCCTAGT CTGGCTAATC AAGCCTGGTA TGACCGGGTG 
GAAACGAACC TTGATGGTAG TTGCGCAAAA GGTGAGCTAA CCTATTCCGG CGGTAAATAC 
CGGGGCCAGG GAACTGTTCA GCATACTTTC TACGATGAAG ACGGTAAGTC CTCCATCGAA 
ATAACTTATG AAATCAACCG CAAGCCCAGC GCAAAAGCAA TACAACCAAT CCAGGTCCTG 
GGGCGTTATG AGTATAACAA CGATAATGAC TATGTACCGG CGACCGATTT TGTGGCGGGT 
AAAGATACTG TTATCCAGGT AATCCTGCCG GATGATATCA AAGCCGAAGA TCAATCCAAT 
GCCAGGGTGG AGATATACCA CGAAGGTAAT AAGATAGCTA CTTTGAGCAA ATTTAAAAAA 
GACAAAGAAA ACAACAGTTT AATTTTTATT CCTTCAAGCC GCTCCAGTTG CGGTAATTGG 
AAGGCGGGAA GATATAAATT TGTAGCCACA ATAGGCGAAT CCGAGGAACT AACTTTGGAT 
GATGTTCTTT TTCAAGAACA ACGCAAGCTT AAAGTTTTAG CCGTGCCGGT CAAGGCCAAC 
TACGCGGGTA CCATCGAAAC AGCTGATAGT CAGTGGAAGA ATGGGGGTGC CTTTATGCGC 
CGGGTTTATC CCATAGCCTA TAATAATATC ACTTATAAGC AGGGTAGTCT TTTTGATGCT 
AGTGATGCCA GTTATGATAT TACTACTGAT GCTGGCCGGT TAAAGCTCTG GCAGGCCTTA 
AACGAGTTGC AAAAAAATGG TGGTCCTTAT GACCTGATTG TTGGATTCAT TGAAAAAGGT 
ATCTTACTGT CAAATGGCAG TATATTGCAG GGTTATACCT ATGGTGAGCC ATCCAACATA 
GTGGTAAATT CCGATCAGGA TATGCAGGCG ACTGTAGCCC ATGAAATAGC CCACATTTAC 
AAGGTAGGCG ATGAATACCA GGGAGAATCA TATAATTTAG GTATAAATTC TCCTCCCCTG 
GGCTACCAGG GTTCGGATTG GCATGACCCA AATAAAACAG TTACTGCCAG CGATCCAAAA 
GTTCAGCCTT TTCCTGGTGC AGAAGGAGCT TTAATCTCTA AAAAACTGCA TCCTTATGAT 
ACCGGAGGGC GTGGCTTACT AGAAGACTCT ATTTGTTTTA TGGGCAGCGG TGCCTCCCAA 
AGCAAGAATT GGATTACACC GAGCGTGTGG AAGCATTTGT TTAAGGCTCT GGCAGCCCCA 
ACTACTGCGG CTTCTGACAG CTCAATCCGG GTATTACAAA GCACAGAGGG GGAAACCCGG 
GTGATCGAAG CTTCTGGATG GGTTAGCCGC AGCGGAGTAG TGGAACTCAG CCAGCCCTGG 
CACAGTTATT ATACTACCCA GCCGCTAGTT AATCAGACCG GTACTTATAC TATCCAGGCA 
GTAGATACCC AAGGAACCGT ATTAGCCAGT AATGGTTTCA CCCCGTCATT TTTCGTCCGT 
TCCAACCCGC CGCGGCAGCT GGAGCGGGCC CCGTTTGCCC AGGTACTGGT ACCTTTCCCG 
GCAGGAACCG ATAAGTTTGT AGTGCTTGAT CAAGACAATA CCCTACTGGC CGAGTTACCG 
GTAACTGCCA ATAAACCCAC CGTGGCCATT ACTGCACCGG CAGCCGGACA GAATCTGACC 
GGCACCAGTA CCATCACCTG GACAGCAGAA GATGACGACA AAGACAATTT ATCCTATGAA 
GTTGAATATA GCCCCGACGG TTCCAACTGG GAACTGCTCG CATATGACAT AAGGGATACA 
CAATGGGTGC AGGATTTCAG CCAGCTGCCA GGTGGCAACC AGGCCCAAAT CCGGGTTACC 
GCTCATGACG GCATTAACAG TACTGCTGCG GTTAGCGGCA TCTTCAGTGT TGCTCTGAAA 
GCACCGGAAG TTTTTATTGA AGCTCCGGTC TCAGAAGCCA GTTATTCTAC CGCTGAAGGC 
GGTGTAGTCC TGCAGGGGTC GGCCTATGAT CCGCAAGAAG GACAGATTTA TGATGATAAT 
AGACTTGTCT GGACTTCCGA CCAAGCGGGT GAACTGGGCC GCGGACCATC GGTATTTACG 
AACTTACTGA GCGAAGGAAA ACATTTGATC ACCCTGACCG CTACTAATAT TGCTGGTCTA 
TCGAGTCAAG TGAGTATTAG CTTGAACATA ACTTCTTCAG CAGTGGTGAA TCCTGGTACC 
TATACCGAGT TGATAGAAAA AACTTTTACT GATGCTAGCC AGCGCAAGGT ACTTTTTAAT 
AAGCCTGTAA ATGCAGCTAC TTTGCAAAAC AATATTCGGA TAATGGATTC AGCAAATAAC 
ATGGTTCCAA TTAGGATAGA GGCAGGCGAT GATGGGGTGT CGGCCTTAAT TTATCCATCG 
ACAGGAGCTT TCTCGCCAGG CAATTATACT ATTTACATTG AGCAAGGAAT TATGTCCGCA 
GACGGTCAGC CTTTAAACGC TGGCTACAAA ATGAACTTTA AGATGAAATA G
 
Protein sequence
MKNRLQSILA LMLTVALLFS GLCLPQTAWA ADDKTPEELE ITWRIKANAD HAWSSESARE 
NGKVYARYNL NDSFMLDLAG TTVLSRTGIS WGGNPYFQPI TENEYSRSCA GGGTYTTWYL 
SELQRWTEKG SEKKDFESTT VENWQYRWPG KEHEGADDNP IPWLEIIPPE SDNEPIRYRI 
CLEPFFFIDY DTADEYFETT GTIHSNWTDW EGSHSETGEL GNHAGGITPS LANQAWYDRV 
ETNLDGSCAK GELTYSGGKY RGQGTVQHTF YDEDGKSSIE ITYEINRKPS AKAIQPIQVL 
GRYEYNNDND YVPATDFVAG KDTVIQVILP DDIKAEDQSN ARVEIYHEGN KIATLSKFKK 
DKENNSLIFI PSSRSSCGNW KAGRYKFVAT IGESEELTLD DVLFQEQRKL KVLAVPVKAN 
YAGTIETADS QWKNGGAFMR RVYPIAYNNI TYKQGSLFDA SDASYDITTD AGRLKLWQAL 
NELQKNGGPY DLIVGFIEKG ILLSNGSILQ GYTYGEPSNI VVNSDQDMQA TVAHEIAHIY 
KVGDEYQGES YNLGINSPPL GYQGSDWHDP NKTVTASDPK VQPFPGAEGA LISKKLHPYD 
TGGRGLLEDS ICFMGSGASQ SKNWITPSVW KHLFKALAAP TTAASDSSIR VLQSTEGETR 
VIEASGWVSR SGVVELSQPW HSYYTTQPLV NQTGTYTIQA VDTQGTVLAS NGFTPSFFVR 
SNPPRQLERA PFAQVLVPFP AGTDKFVVLD QDNTLLAELP VTANKPTVAI TAPAAGQNLT 
GTSTITWTAE DDDKDNLSYE VEYSPDGSNW ELLAYDIRDT QWVQDFSQLP GGNQAQIRVT 
AHDGINSTAA VSGIFSVALK APEVFIEAPV SEASYSTAEG GVVLQGSAYD PQEGQIYDDN 
RLVWTSDQAG ELGRGPSVFT NLLSEGKHLI TLTATNIAGL SSQVSISLNI TSSAVVNPGT 
YTELIEKTFT DASQRKVLFN KPVNAATLQN NIRIMDSANN MVPIRIEAGD DGVSALIYPS 
TGAFSPGNYT IYIEQGIMSA DGQPLNAGYK MNFKMK