| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0161 |
|---|
| Symbol | |
|---|
| ID | 4281805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 184735 |
|---|
| End bp | 186915 |
|---|
| Gene Length | 2181 bp |
|---|
| Protein Length | 726 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638137058 |
|---|
| Product | alpha-tubulin suppressor and related RCC1 domain-containing proteins-like protein |
|---|
| Protein accession | YP_752884 |
|---|
| Protein GI | 114565730 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[Z] Cytoskeleton |
|---|
| COG ID | [COG5184] Alpha-tubulin suppressor and related RCC1 domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGACGAT ACCATTTGAA ACGTAGTGGT GGAGCTGTCA CATTAGTATT ATTGTTGTCC
CTGCTTTTAA GCCTGGGAAT GGTTATGCCG GTGGCAGCAC AGGATTCGAT GGTCAGGAGC
TGTAGTCCAG TAAAAGGAAC TGATTTAATA GAGCCGCAGG TGGCAGCAGG CGAGGCAACC
AGCTTCGCCC TCAGGGAGGA TCAGAAGCTC TGGGGATGGG GGATTGATAA TTACGGTCAG
GTGGGTAATG GCAAGATAAT TGTGGATGGG GACGAGCGCA ATGGTCAAGA AACCCCGTAT
CTGCTGACGG AAAAGGGTTT TAATGAGGGT TTTAAACAGG TTGCTGCCGG GCGCTGGCAT
ACCCTGGCGG TGAAAAATGA TGGTACTGTA TGGGGATGGG GAAATAATGA AAAGGGCCAG
TTGGGTAATC TGCCCCTGGG ACCGCACAGT ACACCGCAGC AGATACCAAA CCTGCAGAAT
ATGAAAGCTG TGGCCTGTGG AGAATTTTTC TCCCTGGCGC TAAATAATGA TGGTACGGTT
TGGGCCTGGG GAAATAATGA TGGAAATGAA CTGGGCAGAG GAGCTACTGG GCCATTCTAT
AATAACCCGG AAAAAGTTAA AGGCCCGGGT GGCACCGGAT ATCTGGATAA TGTTACTGCT
ATCGCTTGTG GACGCTTTCA TGGCCTGGCA TTAAAGAGTG ATGGCACGGT ATGGGCCTGG
GGTGATGGTT CTTGGGGTAC CCTGGGGAAT GGAGAAGATT TCTCCGAAGA AGTCTATCCA
GTCCGGGTAT TGAACCTGAC TGGCGTAAAA AGCATAGATG CCGGAGATTA TTTCTCCCTG
GCGCTTAAGA ACGATGGTAC CGTATGGGCC TGGGGAGGCC GGGGTATTGG AGGACAGCTG
GGTGATGGTG AGGTAGATGA TTTTGTAAAT ATTCCACAGC AGGTTAAAGG ATTGAATGGA
TTGGGTAATC TAAATAATGT GGAGGCTATC ACCTGCGGTA TTAATCATAG CCTGGCTTTG
AAAGACAACG GAACCATCCT GGCCTGGGGA GAAAACTATG GTAGATTAGG TGATGGAGAC
GCTACCTCCA GCGAAAGTCC CGTTCCGGTC TTAACCCAAG ATATTAGTGG AGTGGTAGCT
ATCGCTGCTG GGGGTGAGCA CTCTCTGGCC CGAAAAAATG ACGGTACTGT ATGGGCCTGG
GGAAGCAATC ATCACTATCA GTTAACCGGC GATAATGACA GCGGGGTTCC GGTACAGGTT
GAGGGTATCC CGCTCCTGGC CAAACCCCTT ATAAGCCTGA GTGTGAAAGC GGCGGATGGT
GGGCCGGAAC TGCTTACCTG CTTTATTTCA AAAACTACCG GCTATAAGAT GACCGTGGAG
AATCCATTGG AGGCGGTTAA AATCACACCA GTTCCGGTCT CTGGAGCAAC TGCCTCAGTC
AAACTGAACG GCGTGGTCCA GAACGACGGG ATAGTGAATC TAGCGGTTGA TCCAGAACAG
AATAAAGTCG AAGTGGTAGT CAGCGAATCG GGCAAGGACG ATCTTACCTA TAACATTGAT
ATCAGACGCC TGCGCCTGGC CGACCCTCTG ACTGACCTGA GTGTGAGAGG AAAAGCAGAT
GGGAGCGGTA ATGAATACCT GACCGGGTTC AGCGGGACTA GTTATGCTTA TAATGTAGCG
GTGGAAAATA ATATCGATGC AGTTAAAGTG GTGCCCACCG CAGTATCTGG TGCCACGACA
GTCATCAAGC TGAACGGCGT GCCGCAGAAT GGTGGGGTGA TATCTAATCT TGCTATCGGT
TGGGATAATC GGGTGGATAT AGTAGTAATC CAGGAGGACC GCACCGATCG CAAGTATACT
ATTGAAATTG GCCGTAAGCC AAATTGGAAG CAGGGTTACG AAAACTGGCC GGTAGAGGTG
CAGAAGACCT GGACTATTAA GTTTAACCAG GCGGTTAAAA CCACCGAGGC CGCGAAGTAT
ATCTATGTAA AAGATGCCCA GGGCACGAAA GTACCCCTGA AGGACTTTAT CTGGTCAGAT
AACAACACCA CCGTCAAGGT GCAGGCACAA TCGGCATATA ACACCGGGGC TAAATATACC
CTACATATTG AAACAGCATT GGAATCAGCC CAGGGAACCC CGCTAAATGC AGCAATAGCC
ATGCCATTTA AAATCGAATA G
|
|---|
| Protein sequence | MGRYHLKRSG GAVTLVLLLS LLLSLGMVMP VAAQDSMVRS CSPVKGTDLI EPQVAAGEAT
SFALREDQKL WGWGIDNYGQ VGNGKIIVDG DERNGQETPY LLTEKGFNEG FKQVAAGRWH
TLAVKNDGTV WGWGNNEKGQ LGNLPLGPHS TPQQIPNLQN MKAVACGEFF SLALNNDGTV
WAWGNNDGNE LGRGATGPFY NNPEKVKGPG GTGYLDNVTA IACGRFHGLA LKSDGTVWAW
GDGSWGTLGN GEDFSEEVYP VRVLNLTGVK SIDAGDYFSL ALKNDGTVWA WGGRGIGGQL
GDGEVDDFVN IPQQVKGLNG LGNLNNVEAI TCGINHSLAL KDNGTILAWG ENYGRLGDGD
ATSSESPVPV LTQDISGVVA IAAGGEHSLA RKNDGTVWAW GSNHHYQLTG DNDSGVPVQV
EGIPLLAKPL ISLSVKAADG GPELLTCFIS KTTGYKMTVE NPLEAVKITP VPVSGATASV
KLNGVVQNDG IVNLAVDPEQ NKVEVVVSES GKDDLTYNID IRRLRLADPL TDLSVRGKAD
GSGNEYLTGF SGTSYAYNVA VENNIDAVKV VPTAVSGATT VIKLNGVPQN GGVISNLAIG
WDNRVDIVVI QEDRTDRKYT IEIGRKPNWK QGYENWPVEV QKTWTIKFNQ AVKTTEAAKY
IYVKDAQGTK VPLKDFIWSD NNTTVKVQAQ SAYNTGAKYT LHIETALESA QGTPLNAAIA
MPFKIE
|
|---|
| |