Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0148 |
Symbol | |
ID | 4282036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 172715 |
End bp | 173425 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638137047 |
Product | transposase |
Protein accession | YP_752873 |
Protein GI | 114565719 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1943] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0526667 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAGGG GTATTAACCG TCAAATAATT TTTGAGGATG ATGAGGATTA TCAAAAGTTT CTGTGGATAA TAAAAGATAC CAAAGAAAAA AGTGGCTATG AGATATATGC CTACTGTCTC ATGAGTAATC ACATTCATTT ATTGTTAAAG GAAGTCACGG AAGACCTGGG GATAGTATTT AGAAGGATTG GTGCCAGTTA CGTGTATTGG TATAACTGGA AGTATAGCCG CCGAGGTCAT TTGTTCCAGG CTCGCTATAA AAGTGAGGCA GTTGAAATGG ACAGCTATTT TTTAACGGTG CTTCGCTACA TTCACCAAAA CCCATATAAG GCGGGTATTG TAAAGAATAT AGCCGATTAC CCATGGAGCA GCTATGGGGA ATATGTCGGA GAGCCAAGAA TTTGTGATGT AGAATTTGCT CTCAATATGT TTTCGACCAA CAGGGTGAAT GCGGTAAAAT TGTTTAAGGA GTTCAATTTA GTGGAGAACC AGGATCGGTG CTTGGACTAT GATCAAGATG CAAGACTAAA TGATACCGAG GCTAGCAATT TTATTAGGAG CATCTCTGGT GTCCAAAGCC CAACGGAAAT TCAAGGGTTT AAAAAAGATA AACGTAATGA AGTTATCAAA GAGTGTAAGG CCAAGGGTCT GTCTATCAGG CAAATTGAGC GGCTAACCGG TGTTAGTTTT GGGGTGATAC GAACAATATA A
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Protein sequence | MLRGINRQII FEDDEDYQKF LWIIKDTKEK SGYEIYAYCL MSNHIHLLLK EVTEDLGIVF RRIGASYVYW YNWKYSRRGH LFQARYKSEA VEMDSYFLTV LRYIHQNPYK AGIVKNIADY PWSSYGEYVG EPRICDVEFA LNMFSTNRVN AVKLFKEFNL VENQDRCLDY DQDARLNDTE ASNFIRSISG VQSPTEIQGF KKDKRNEVIK ECKAKGLSIR QIERLTGVSF GVIRTI
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