Gene Swol_0124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0124 
Symbol 
ID4282168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp132556 
End bp133671 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content49% 
IMG OID638137024 
Productglycosyl transferase family protein 
Protein accessionYP_752850 
Protein GI114565696 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.90838e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTAG TGTTGAAGAT GGGGGTTTGT AATATAATGT CGGCACCCGT GTATATCATT 
GTGCTGTTGT CAGCTTTTTT TATAGCTTAT CTATCCATGC CAGGAGTTAT TAAAATCGCC
TACAGAATTG GAGCCATTGA CCAGCCGGAT CAGCGAAAGG TTCACAGCGC TAAGATGCCC
CGACTGGGCG GAATGTCGAT TTTTCTGGCT TTTATTTTTT CCATGATTAT TTTGCAGAAG
TATTCCGGCC CCTACCTGGG TATTATTCTG GGTGCCAGTA TAGTTTTCCT GGTAGGGCTG
TTGGATGATA TATTTCAGCT CTCTGCTGGT GTAAAGCTCT TGGGGCAGTC CCTGGCCGCA
GCCGTGGCCA TATATTTTGG CGTAATGGTA CACTTTGTGA CCAATCCCTT TGACGGCTTG
ATGGCCCTGG GTTATTTCAG TATTCCCCTG ACCTTTTTAT GGATAGTTGG CATCAGCAAT
GCCATAAACC TCATAGACGG TTTGGACGGG CTGGCTGCCG GGGTCTCCGC CATAGCCGCC
GTTACCATGG GTGTAGTTTC CCTGTTGCAA GGGCAAGTGG AAGTAGCTCT GGTGGCTTTC
CTCCTGCTGG CCTCTATCTT GGGCTTCCTC CCCTATAACT TTAACCCGGC CCGAACCTTT
ATGGGTGATT GCGGTTCCAA TCTTTTGGGC TTCATACTGG GCTGCCTGGC TATTCTGGGT
ACCGCCAAGA GCGCCACCCT GATATCCCTT TTGTTGCCCA TTGTTATCCT GGGCATCCCC
ATATTTGACA CCTTTTTTGC CATAATTCGC CGTATAAATA AGCGGACTCC CATTTTCAAG
CCCGACAAGG ATCACTTGCA TCACTGCCTG CTGGCCATGG GTATGAGCCA CCGCAACTGC
GTACTCGTAA TCTATGGTAT TAGCGGCTTT TTCGGCCTGG TGGCTATTAC CTTTAGTTTT
ATAACCAGCC CCAAAGCCAG CCTCTTGCTC GGATTGCTTC TCATACTTGT GGTATTGGGA
GCGAGTAAGA TTGGGATGTT CAGCGGAAGC AGTGCCCGGA TGGCGCGGCA GGTCATAGAG
CCCAATCCCA GTGCCAAAAT AAGCGAGCAT ATTTGA
 
Protein sequence
MNLVLKMGVC NIMSAPVYII VLLSAFFIAY LSMPGVIKIA YRIGAIDQPD QRKVHSAKMP 
RLGGMSIFLA FIFSMIILQK YSGPYLGIIL GASIVFLVGL LDDIFQLSAG VKLLGQSLAA
AVAIYFGVMV HFVTNPFDGL MALGYFSIPL TFLWIVGISN AINLIDGLDG LAAGVSAIAA
VTMGVVSLLQ GQVEVALVAF LLLASILGFL PYNFNPARTF MGDCGSNLLG FILGCLAILG
TAKSATLISL LLPIVILGIP IFDTFFAIIR RINKRTPIFK PDKDHLHHCL LAMGMSHRNC
VLVIYGISGF FGLVAITFSF ITSPKASLLL GLLLILVVLG ASKIGMFSGS SARMARQVIE
PNPSAKISEH I