| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0116 |
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| Symbol | |
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| ID | 4282160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 122440 |
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| End bp | 123921 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638137016 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_752842 |
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| Protein GI | 114565688 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0354257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGAAT CCGAATTAAA TATTAGCGAG CTAAAGAAGG TACGGCTCGA GAAACTGGCT
GAACTAAAGG AAATGGGAAT TGAGCCCTTT GGTCGGAGAT TTGAACGCGA CTCCATGGCT
CAGAATATAA AGGAAGCTTT CTCCGAACTG GAAGGGAAGA CCATAGCCAT TGCCGGAAGA
ATAATGTCCA AGCGAAGACA TGGCAAGGCC GGTTTTGCTA ATTTAGCCGA TTTATCCGGC
AGCATTCAGC TCTATTTTCG TCAGGATGAT TTAGGCCCGG AGAAGTACGA ACTATATAAA
AAGCTGGATA TAGGCGATAT TCTAGGAATC CAAGGCGAAG TTTTTCGCAC CCAGAAGGGA
GAAATAAGCA TCCATGTGAG GGATCTATAC TACCTCTCCA AATCCCTTAC CCCTCTGCCG
GAAAAATGGC ATGGTTTAAA GGATGTGGAA CTCCGCTACC GCCAGCGTTA TGTGGACTTA
ATCGTAAACC CCGAGGTTAA GGAAGTCTTC GTCAAGCGCA GCCGCATAAT CAAGGAAATG
AGGAACTACC TGGATGACAG GGGATTCCTG GAAGTAGAGA CCCCTATGAT GCAGCCCATA
CCCGGCGGCG CTACCGCCCG GCCTTTTATT ACCCACCACA ACGCTCTGGA CATGGAGCTT
TACTTACGCA TAGCCCCGGA GCTCTATCTC AAGCGCCTGA TTGTGGGCGG GCTGGAAAAG
GTCTATGAAA TTAATCGCAA CTTCCGCAAT GAAGGCATAT CCACCCGGCA TAACCCCGAG
TTTACCATGC TGGAGATCTA CCAGGCCTAT GGGGATTATG AAGTGATGAT GCAGCTTTGC
GAGGATTTGA TTTCCGCGGT GATGCTTAAG GTCAATGGCA GTATGCAAAT AGATTTTGAA
GGAGAGCAGC TTGATTTCAC CCCCCCCTGG CGGCGCGTGA CCATGCTGGA TGCCATTAAG
GAAGCCGCCG GACTGGATTT CTCCCTTATC AAGAGCGATG AAGATGCTTG CCAGGCAGCC
TGGCAGTTGG GTCTGGAGGT CAAAGCCGGT GCTTCCCGGG GAGAGCTAAT TAACGAAATT
TTTGAGCAAT TTGTTGAGGA CAAGCTCATT CAACCCACCT TTGTCTACGG GCACCCGGTG
GAAGTATCGC CCTTGGCCAA GAGAAACCTG GAAACCCCCG AATTTACTGA CCGCTTTGAG
CTCTTTATTA TGCAGCGGGA AATAGCCAAT GCCTTTTCCG AGTTGAACGA CCCCATAGAC
CAGAAGGAAC GCTTTATCAA GCAGGTAGAG AAGAGGGCTG GCGGTGATGC TGAGGCCCAC
ATGATGGACG AAGATTACAT AAACGCCCTG GAATATGGCA TGCCTCCGGC AGGAGGAATG
GGCATAGGAA TAGACCGCCT GGTGATGCTG ATGACCGGCT CACCCTCCAT CAGAGATGTC
ATCCTTTTCC CCACCCTCCG CCCGCGCAGC AGTGAGGCGT AA
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| Protein sequence | MSESELNISE LKKVRLEKLA ELKEMGIEPF GRRFERDSMA QNIKEAFSEL EGKTIAIAGR
IMSKRRHGKA GFANLADLSG SIQLYFRQDD LGPEKYELYK KLDIGDILGI QGEVFRTQKG
EISIHVRDLY YLSKSLTPLP EKWHGLKDVE LRYRQRYVDL IVNPEVKEVF VKRSRIIKEM
RNYLDDRGFL EVETPMMQPI PGGATARPFI THHNALDMEL YLRIAPELYL KRLIVGGLEK
VYEINRNFRN EGISTRHNPE FTMLEIYQAY GDYEVMMQLC EDLISAVMLK VNGSMQIDFE
GEQLDFTPPW RRVTMLDAIK EAAGLDFSLI KSDEDACQAA WQLGLEVKAG ASRGELINEI
FEQFVEDKLI QPTFVYGHPV EVSPLAKRNL ETPEFTDRFE LFIMQREIAN AFSELNDPID
QKERFIKQVE KRAGGDAEAH MMDEDYINAL EYGMPPAGGM GIGIDRLVML MTGSPSIRDV
ILFPTLRPRS SEA
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