Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0109 |
Symbol | |
ID | 4282385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 116519 |
End bp | 117286 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638137010 |
Product | Baf family transcriptional regulator |
Protein accession | YP_752836 |
Protein GI | 114565682 |
COG category | [K] Transcription |
COG ID | [COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor |
TIGRFAM ID | [TIGR00671] pantothenate kinase, type III |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00933818 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGATACTGG TCTTTGATGT GGGCAATACC AATACAGTAA TCGGTGTTTA TGATAGGGAG AAGCTTTTAA ACCACTGGAG GATAAGAACC AATCCCCAGC GTACCTGTGA CGAATACGGA ATATTGCTGC GCTCCCTGTT GGAAAACGAT AAATTAAATC TAAAGGATAT AAAATCGGTG GTTATTTCCT CGGTTGTTCC TACATTGATG ATGGAACTGG AGTGGATGAG CCGTAAATTT TTTGCCTGCC GCCCTCTGGT TATCGGCCCG GGAGTTAAGA GCGGCCTGGC TATAAAATAT GAGAATCCCA GAGAAGTAGG GGCTGACCGG GTGGTAAATG CGGTGGCCGC CTATGACAAG TATGGGGGGC CTCTGATAAT CGTAGACTTT GGCACTGCCA CCACCTTTTG CGTAGTAAGC GCGAAAGGAG AGTATTTGGG CGGAGCCATT GCCCCCGGGA TAATAATATC CACTGAAGCC CTGGTCTCCA AAGCCGCCAA ACTGCCGCGA GTGGAGCTGC AACGGCCCCG CAGCCTGATT GGCAAAAATA CCGTCAGCAG CATGCAGGCC GGGATAATGT ATGGCTTTGT AGGACAGGTG GAGGGGATTA TAACCCGGAT GAAAACGGAA ATCGAAACTA CACCCCAGGT GATTGCCACG GGTGGCCTGG CTGCGGTAAT CGCCCGTGAG ACTGATGTGA TCGATAAAGT TGACGAATTC CTCACCTTGG ATGGATTACG TTTGATCTAC GAAATGAACC GGGGATAA
|
Protein sequence | MILVFDVGNT NTVIGVYDRE KLLNHWRIRT NPQRTCDEYG ILLRSLLEND KLNLKDIKSV VISSVVPTLM MELEWMSRKF FACRPLVIGP GVKSGLAIKY ENPREVGADR VVNAVAAYDK YGGPLIIVDF GTATTFCVVS AKGEYLGGAI APGIIISTEA LVSKAAKLPR VELQRPRSLI GKNTVSSMQA GIMYGFVGQV EGIITRMKTE IETTPQVIAT GGLAAVIARE TDVIDKVDEF LTLDGLRLIY EMNRG
|
| |