Gene Swol_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0080 
Symbol 
ID4281714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp90252 
End bp90812 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content47% 
IMG OID638136982 
ProductAbrB family transcriptional regulator 
Protein accessionYP_752808 
Protein GI114565654 
COG category[K] Transcription 
COG ID[COG2002] Regulators of stationary/sporulation gene expression 
TIGRFAM ID[TIGR01439] looped-hinge helix DNA binding domain, AbrB family
[TIGR02851] stage V sporulation protein T 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGCAA CCGGAATTGT ACGCCGCATT GACGACCTGG GAAGGGTTGT TATTCCCAAG 
GAAATTCGCA GAACATTACG CATTCGCGAG GGAGACCCTC TGGAAATTTT CGTTGACCGT 
GAAGGTGAGG TTATTTTAAA GAAATATTCA CCCATAGGAG AGCTAGGGGA TTTTGCTAAA 
GAGTATGCGG ACTCGCTAAA CGAGACCATT GGTCATATCT CTATGATAGC TGACCGGGAT 
GTGATTATTG CCGTAGCCGG AGCCAATAAA AGAGAGTTCC TAAGTAAAGC TATCGGCAAA 
GCGGTGGAGA GGGCTATTGA TGAAAGAAGC ACCCTGATCA TGAATGACCT GGATGCTCCA 
GATGACGACA ACCTGCATGT TATTCAGAAT GATGACCGGG AATATACCAT CAAAGCACAA 
GTAATTGCTC CGATAATAAC TCAAGGGGAT CCCATCGGCG CCGTTATCAT AGTAAGCAAG 
GAAGCCGTTA AGATGGGGGA TATGGAAGTA AAGCTGGCGG AAACCGCCGC CGGATTCCTG 
GCCAAACAGA TGGAGCAGTA A
 
Protein sequence
MKATGIVRRI DDLGRVVIPK EIRRTLRIRE GDPLEIFVDR EGEVILKKYS PIGELGDFAK 
EYADSLNETI GHISMIADRD VIIAVAGANK REFLSKAIGK AVERAIDERS TLIMNDLDAP 
DDDNLHVIQN DDREYTIKAQ VIAPIITQGD PIGAVIIVSK EAVKMGDMEV KLAETAAGFL 
AKQMEQ